RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 RFC1P35251 1148 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 GGCXP38435 758 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 MPLP40238 635 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 DHPSP49366 369 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 YWHAZP63104 245 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 TRIM14Q14142 442 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 GEN1Q17RS7 908 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 CCDC14Q49A88 953 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 TDRD12Q587J7 1177 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 FAM133BQ5BKY9 247 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 FAM102AQ5T9C2 384 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 PLEKHA7Q6IQ23 1121 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 RFWD3Q6PCD5 774 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 KIAA1324Q6UXG2 1013 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 TRIM72Q6ZMU5 477 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 PRR23CQ6ZRP0 262 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 CYP4V2Q6ZWL3 525 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 BEND5Q7L4P6 421 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 LPCAT2Q7L5N7 544 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 IPO4Q8TEX9 1081 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 ZC3H10Q96K80 434 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 BTBD6Q96KE9 485 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 CFAP57Q96MR6 1250 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 ACOX2Q99424 681 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 SLC2A11Q9BYW1 496 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 THAP2Q9H0W7 228 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 DUSP15Q9H1R2 295 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 FAM204AQ9H8W3 233 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 NHEJ1Q9H9Q4 299 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 POPDC2Q9HBU9 364 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 PIGVQ9NUD9 493 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 SEPT11Q9NVA2 429 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 ASNSD1Q9NWL6 643 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 ADAM22Q9P0K1 906 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 COX16Q9P0S2 106 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 STIM2Q9P246 746 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 SLC12A6Q9UHW9 1150 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 TLR6Q9Y2C9 796 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 SLC27A6Q9Y2P4 619 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 PCDHGA5Q9Y5G8 931 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 RAD54BQ9Y620 910 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 CHD5Q8TDI0 1954 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 SDK1Q7Z5N4 2213 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 ZNF292O60281 2723 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 SSU72P8A0A1W2PR75 194 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 WASH3PC4AMC7 463 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 NPC1O15118 1278 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 TIMM44O43615 452 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 ACSL4O60488 711 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 HSF2BPO75031 334 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 NDUFS2O75306 463 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 TRUB2O95900 331 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 GZMAP12544 262 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 BCKDHBP21953 392 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 KCNA4P22459 653 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 SCNN1AP37088 669 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 GALCP54803 685 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 RNASE9P60153 205 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 CDK17Q00537 523 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 RING1Q06587 406 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 C1QBPQ07021 282 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 MAMLD1Q13495 774 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 FNDC3BQ53EP0 1204 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 DCAF6Q58WW2 860 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 EFHC1Q5JVL4 640 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 ARMCX6Q7L4S7 300 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 CYP2U1Q7Z449 544 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 FAM217AQ8IXS0 508 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 DRC7Q8IY82 874 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 TMEFF1Q8IYR6 380 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 ZNF683Q8IZ20 524 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 C3orf20Q8ND61 904 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 WFDC5Q8TCV5 224 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 RXFP2Q8WXD0 754 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 PIGKQ92643 395 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 IQCDQ96DY2 449 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 PRICKLE1Q96MT3 831 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 PEBP4Q96S96 227 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 SMOC1Q9H4F8 434 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 VPS45Q9NRW7 570 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 ELOVL2Q9NXB9 296 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 SALL4Q9UJQ4 1053 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 FBXO10Q9UK96 956 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 HCN2Q9UL51 889 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 PLA2G4CQ9UP65 541 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 NEU3Q9UQ49 428 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 STON1Q9Y6Q2 735 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 SPTBN4Q9H254 2564 aa9.05□□□□□ -0.96
PDLIM5-213ENST00000509357 NYNRINQ9P2P1 1898 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 FANCMQ8IYD8 2048 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 A0A1W2PQF6 199 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 SIGLEC16A6NMB1 481 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 KCNU1A8MYU2 1149 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 CCP110O43303 1012 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 RTN2O75298 545 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ZNF217O75362 1048 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ENDOD1O94919 500 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 LCA5LO95447 670 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 TPM3P06753 285 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms