RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 CLDN11O75508 207 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 LUC7L3O95232 432 aaKnown RBP10.04□□□□□ -0.8
SFXN1-205ENST00000506963 APODP05090 189 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 CD72P21854 359 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 TNFRSF4P43489 277 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 DGKGP49619 791 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 VAV2P52735 878 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 PLK1P53350 603 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 CDH4P55283 916 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 OXCT1P55809 520 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 RPS24P62847 133 aaKnown RBP10.04□□□□□ -0.8
SFXN1-205ENST00000506963 CCZ1BP86790 482 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 CCZ1P86791 482 aaPredicted RBP10.04□□□□□ -0.8
SFXN1-205ENST00000506963 SLC25A11Q02978 314 aaKnown RBP10.04□□□□□ -0.8
SFXN1-205ENST00000506963 MESP2Q0VG99 397 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 UBXN2BQ14CS0 331 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 EIF4HQ15056 248 aaKnown RBP10.04□□□□□ -0.8
SFXN1-205ENST00000506963 BOLA3Q53S33 107 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 EFHC2Q5JST6 749 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 ERMARDQ5T6L9 678 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 GRAMD4Q6IC98 578 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 LRRC31Q6UY01 552 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 ZNF662Q6ZS27 426 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 NUDT18Q6ZVK8 323 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 C14orf80Q86SX3 495 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 TXLNBQ8N3L3 684 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 FLCNQ8NFG4 579 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 WFIKKN2Q8TEU8 576 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 TEKT4Q8WW24 435 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 IGSF8Q969P0 613 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 PEBP4Q96S96 227 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 FOXQ1Q9C009 403 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 ARHGEF4Q9NR80 690 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 TMPRSS4Q9NRS4 437 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 PLK2Q9NYY3 685 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 ZNF212Q9UDV6 495 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 OR12D3Q9UGF7 316 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 VANGL2Q9ULK5 521 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 CLEC4EQ9ULY5 219 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 USP18Q9UMW8 372 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 TBC1D30Q9Y2I9 924 aa10.04□□□□□ -0.8
SFXN1-205ENST00000506963 CACNA1IQ9P0X4 2223 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 CACNA1HO95180 2353 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 RCCD1A6NED2 376 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 CHURC1-FNTBB4DL54 471 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 E9PAM4 449 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 K7EQS6 105 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 TIMM44O43615 452 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 PRPSAP2O60256 369 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 EGFP01133 1207 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 IL1R2P27930 398 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 HLA-FP30511 346 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 SLC1A1P43005 524 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 KIR2DL1P43626 348 aaPredicted RBP10.03□□□□□ -0.8
SFXN1-205ENST00000506963 HCAR3P49019 387 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 SLC12A1Q13621 1099 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 DMC1Q14565 340 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 E2F5Q15329 346 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 DPYSL2Q16555 572 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 HSF5Q4G112 596 aaPredicted RBP10.03□□□□□ -0.8
SFXN1-205ENST00000506963 LRRC38Q5VT99 294 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 CXorf57Q6NSI4 855 aaKnown RBP10.03□□□□□ -0.8
SFXN1-205ENST00000506963 SCYL2Q6P3W7 929 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 POLNQ7Z5Q5 900 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 ANKS1BQ7Z6G8 1248 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 SETD3Q86TU7 594 aaPredicted RBP10.03□□□□□ -0.8
SFXN1-205ENST00000506963 CCAR2Q8N163 923 aaKnown RBP10.03□□□□□ -0.8
SFXN1-205ENST00000506963 NAT16Q8N8M0 369 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 ACRBPQ8NEB7 543 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 FAM71BQ8TC56 605 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 BTBD6Q96KE9 485 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 RPRD1AQ96P16 312 aaPredicted RBP10.03□□□□□ -0.8
SFXN1-205ENST00000506963 SNRNP25Q9BV90 132 aaKnown RBP10.03□□□□□ -0.8
SFXN1-205ENST00000506963 ZYG11BQ9C0D3 744 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 SIK2Q9H0K1 926 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 LMAN1LQ9HAT1 526 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 NDRG2Q9UN36 371 aaKnown RBP10.03□□□□□ -0.8
SFXN1-205ENST00000506963 ADGRG1Q9Y653 693 aa10.03□□□□□ -0.8
SFXN1-205ENST00000506963 CXorf51AA0A1B0GTR3 108 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 TBC1D3BA6NDS4 549 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 WASH4PA8MWX3 477 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 PRRT4C9JH25 899 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 FAM72CH0Y354 149 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 NPC1O15118 1278 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 TRIM24O15164 1050 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 PI15O43692 258 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 NRDCO43847 1150 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 LRIG2O94898 1065 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 PAPSS2O95340 614 aaPredicted RBP10.02□□□□□ -0.81
SFXN1-205ENST00000506963 RARAP10276 462 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 PABPC1P11940 636 aaKnown RBP10.02□□□□□ -0.81
SFXN1-205ENST00000506963 HNRNPLP14866 589 aaKnown RBP eCLIP10.02□□□□□ -0.815e-33■■■■□ 19.7
SFXN1-205ENST00000506963 RHOQP17081 205 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 AVPR2P30518 371 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 GGCXP38435 758 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 MAPKAPK2P49137 400 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
SFXN1-205ENST00000506963 IRAK1P51617 712 aa10.02□□□□□ -0.81
SFXN1-205ENST00000506963 MRPS21P82921 87 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms