RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 CBFBQ13951 182 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 AAK1Q2M2I8 961 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 TTC22Q5TAA0 569 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 ATG9BQ674R7 924 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 ANKRD40Q6AI12 368 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 ACSM6Q6P461 480 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 C16orf89Q6UX73 402 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 OR4N4Q8N0Y3 316 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 NANOGP1Q8N7R0 232 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 RBMXL3Q8N7X1 1067 aaKnown RBP2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 SPPL3Q8TCT6 385 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 THAP4Q8WY91 577 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 CPT1BQ92523 772 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 GOLGA1Q92805 767 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 EDC3Q96F86 508 aaKnown RBP2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 HS6ST2Q96MM7 605 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 ASB2Q96Q27 587 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 SNX18Q96RF0 628 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 MMS19Q96T76 1030 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 MACROD1Q9BQ69 325 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 RXFP3Q9NSD7 469 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 SAGE1Q9NXZ1 904 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 RRN3Q9NYV6 651 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 TFCP2L1Q9NZI6 479 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 SH3BP4Q9P0V3 963 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 RAB21Q9UL25 225 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 ZBTB1Q9Y2K1 713 aa2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 UBE2J1Q9Y385 318 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P35-201ENST00000503360 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 GXYLT2A0PJZ3 443 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 SERINC4A6NH21 518 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 SLC38A8A6NNN8 435 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 E7EVH7 732 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 H7C1Q1 480 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 FYB1O15117 783 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 NKX2-8O15522 239 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 SMAD6O43541 496 aaKnown RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 MT-CO3P00414 261 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 MBPP02686 304 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 APEHP13798 732 aaKnown RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 RXRAP19793 462 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 MATN1P21941 496 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 PAX3P23760 479 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 JAK3P52333 1124 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 RPL15P61313 204 aaKnown RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 RAE1P78406 368 aaKnown RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 HOXA4Q00056 320 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 CFHR3Q02985 330 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 TAF12Q16514 161 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 FAM187BQ17R55 369 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 GALNTL6Q49A17 601 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 FBXO47Q5MNV8 452 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 CYP26C1Q6V0L0 522 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 TRIM72Q6ZMU5 477 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 SYT13Q7L8C5 426 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 BCDIN3DQ7Z5W3 292 aaKnown RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 C2CD5Q86YS7 1000 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 NRACQ8N912 160 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 OR52L2PQ8NGH6 319 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 MAFAQ8NHW3 353 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 NPIPB3Q92617 1050 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 EVI5LQ96CN4 794 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 DAZAP1Q96EP5 407 aaKnown RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 FAR2Q96K12 515 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 UBXN10Q96LJ8 280 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 PYM1Q9BRP8 204 aaKnown RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 ELOVL1Q9BW60 279 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 CHODLQ9H9P2 273 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 ABHD10Q9NUJ1 306 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 LIN7CQ9NUP9 197 aaKnown RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 TRNAU1APQ9NX07 287 aaKnown RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 NDUFAF4Q9P032 175 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 KCND3Q9UK17 655 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 FEM1BQ9UK73 627 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 BAG5Q9UL15 447 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 TRPC5Q9UL62 973 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 FZD4Q9ULV1 537 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 GTF2A1LQ9UNN4 478 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 SLC12A4Q9UP95 1085 aa2.75□□□□□ -1.97
HMGB1P35-201ENST00000503360 WDR17Q8IZU2 1322 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3DA0A087WVF3 549 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3IA0A087WXS9 549 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3EA0A087X179 549 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3KA0A087X1G2 549 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3BA6NDS4 549 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3FA6NER0 549 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3LB9A6J9 549 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 CLIC1O00299 241 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 SH3BP5O60239 455 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 GCATO75600 419 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TK1P04183 234 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 ALPLP05186 524 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 PYGLP06737 847 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 CYP21A2P08686 494 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 CHRM5P08912 532 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3HP0C7X1 549 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 GRK5P34947 590 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 CDK7P50613 346 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 PAPOLAP51003 745 aaKnown RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 RBM5P52756 815 aaKnown RBP eCLIP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms