RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 RAP1GAP2Q684P5 730 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 WDR59Q6PJI9 974 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 CEP68Q76N32 757 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 LGI2Q8N0V4 545 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 CFAP52Q8N1V2 620 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 ATP6V0D2Q8N8Y2 350 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 HJURPQ8NCD3 748 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 PGAP3Q96FM1 320 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 CCDC42Q96M95 316 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 AGPAT1Q99943 283 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 PIGVQ9NUD9 493 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 STIM2Q9P246 746 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 INVSQ9Y283 1065 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 EPN1Q9Y6I3 576 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 STON1Q9Y6Q2 735 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 CFAP54Q96N23 3096 aa16.52■□□□□ 0.23
CTDSP1-214ENST00000497677 KIAA1549LQ6ZVL6 1849 aa16.52■□□□□ 0.23
CTDSP1-214ENST00000497677 MYO18AQ92614 2054 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 SYNJ2BP-COX16A0A087WUM0 186 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 SOWAHDA6NJG2 315 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 GOLGA8SH3BPF8 625 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 NPC1O15118 1278 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 ALDH1A2O94788 518 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 RETP07949 1114 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 PABPC1P11940 636 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 FERP16591 822 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 GABRG2P18507 467 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 CD70P32970 193 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 IL12RB1P42701 662 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 CENPCQ03188 943 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 ZNF234Q14588 700 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 ASIC2Q16515 512 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 CLEC16AQ2KHT3 1053 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 SLC25A52Q3SY17 297 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 PLK5Q496M5 336 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 USP39Q53GS9 565 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 FSCBQ5H9T9 825 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 CHST9Q7L1S5 443 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 PHF13Q86YI8 300 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 MSANTD4Q8NCY6 345 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 WFIKKN2Q8TEU8 576 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 HMGB4Q8WW32 186 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 TBCBQ99426 244 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 DUSP15Q9H1R2 295 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 NHEJ1Q9H9Q4 299 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 LUC7LQ9NQ29 371 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 RRAGDQ9NQL2 400 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 ARHGEF38Q9NXL2 777 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 COX16Q9P0S2 106 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 NCDNQ9UBB6 729 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 SLC12A6Q9UHW9 1150 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 GGA2Q9UJY4 613 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 INTS6Q9UL03 887 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 RAB23Q9ULC3 237 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 PPP2R2CQ9Y2T4 447 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 RAD54BQ9Y620 910 aa16.51■□□□□ 0.23
CTDSP1-214ENST00000497677 EIF3CLB5ME19 914 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 PAGE1O75459 146 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 NDUFA10O95299 355 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 ABCB4P21439 1286 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 P2RY2P41231 377 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 ATXN1P54253 815 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 GSCP56915 257 aaPredicted RBP16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 LMAN2Q12907 356 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 SPA17Q15506 151 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 PTPRNQ16849 979 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 MAP7D1Q3KQU3 841 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 ARTNQ5T4W7 220 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 SDE2Q6IQ49 451 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 FBXL22Q6P050 247 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 RAD9BQ6WBX8 426 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 ZNF662Q6ZS27 426 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 PHLDB2Q86SQ0 1253 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 CHSY1Q86X52 802 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 MFN1Q8IWA4 741 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 FRMD1Q8N878 549 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 UCMAQ8WVF2 138 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 RLN3Q8WXF3 142 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 RNF34Q969K3 372 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 EIF3CQ99613 913 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 C11orf70Q9BRQ4 267 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 CIPCQ9C0C6 399 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 DEF6Q9H4E7 631 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 PARD6AQ9NPB6 346 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 STAP1Q9ULZ2 295 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 ADGRG1Q9Y653 693 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 FRYLO94915 3013 aa16.5■□□□□ 0.23
CTDSP1-214ENST00000497677 TCRBV5S1A1TA0A578 114 aa16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 ENDOD1O94919 500 aa16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 LUC7L3O95232 432 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 BCKDHBP21953 392 aa16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 PRKCHP24723 683 aa16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 PRKCIP41743 596 aa16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 SULT1E1P49888 294 aa16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 MTA1Q13330 715 aa16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 AUHQ13825 339 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 FUT11Q495W5 492 aa16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 C5orf22Q49AR2 442 aa16.49■□□□□ 0.23
CTDSP1-214ENST00000497677 MBLAC2Q68D91 279 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms