RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 TRMT61AQ96FX7 289 aaKnown RBP4.49□□□□□ -1.69
SMC4-225ENST00000497203 PRR11Q96HE9 360 aaPredicted RBP4.49□□□□□ -1.69
SMC4-225ENST00000497203 HS6ST2Q96MM7 605 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 NPAS1Q99742 590 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 REEP2Q9BRK0 252 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 SLC26A6Q9BXS9 759 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 ADGRE3Q9BY15 652 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 CIPCQ9C0C6 399 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 JMJD4Q9H9V9 463 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 PDE11AQ9HCR9 933 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 TMEM160Q9NX00 188 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 VPS4AQ9UN37 437 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 DNAJC16Q9Y2G8 782 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 PCDHA10Q9Y5I2 948 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 FNDC1Q4ZHG4 1894 aaPredicted RBP4.49□□□□□ -1.69
SMC4-225ENST00000497203 CYP3A7-CYP3A51PA0A087WV96 503 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 AGAP5A6NIR3 686 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 A6NLC8 198 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 LINC01548A6NM66 108 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 TISP43B9A030 160 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 H7C1Q1 480 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 EXOC3O60645 756 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 HEXIM1O94992 359 aaKnown RBP4.48□□□□□ -1.69
SMC4-225ENST00000497203 MT-CO3P00414 261 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 CYP3A7P24462 503 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 ELF1P32519 619 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 PNPLA4P41247 253 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 CCR5P51681 352 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 COPB1P53618 953 aaKnown RBP4.48□□□□□ -1.69
SMC4-225ENST00000497203 FAM3BP58499 235 aaPredicted RBP4.48□□□□□ -1.69
SMC4-225ENST00000497203 TAS2R50P59544 299 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 HOXA4Q00056 320 aaPredicted RBP4.48□□□□□ -1.69
SMC4-225ENST00000497203 FOXF2Q12947 444 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 GPR162Q16538 588 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 ZNF484Q5JVG2 852 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 ANO7Q6IWH7 933 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 VSTM1Q6UX27 236 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 TRIM72Q6ZMU5 477 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 SYNE3Q6ZMZ3 975 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 PTF1AQ7RTS3 328 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 TSPYL6Q8N831 410 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 SEMA6DQ8NFY4 1073 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 DDB2Q92466 427 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 AKAP1Q92667 903 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMC4-225ENST00000497203 SKA1Q96BD8 255 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 HVCN1Q96D96 273 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 HIC2Q96JB3 615 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 PPP1R10Q96QC0 940 aaKnown RBP4.48□□□□□ -1.69
SMC4-225ENST00000497203 FYTTD1Q96QD9 318 aaKnown RBP4.48□□□□□ -1.69
SMC4-225ENST00000497203 MMS19Q96T76 1030 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 HTATIP2Q9BUP3 242 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 GPR63Q9BZJ6 419 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 PLEKHA2Q9HB19 425 aa4.48□□□□□ -1.69
SMC4-225ENST00000497203 VWA3AA6NCI4 1184 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 BTBD19C9JJ37 291 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 H3BNC9 293 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 ANP32CO43423 234 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 MBPP02686 304 aaPredicted RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 CYP21A2P08686 494 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 APEHP13798 732 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 CHN1P15882 459 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 IGFBP2P18065 325 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 PSMC2P35998 433 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 FOXL2P58012 376 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 WDR5P61964 334 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 SRSF4Q08170 494 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 THOC5Q13769 683 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 MFSD13AQ14CX5 517 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 GLE1Q53GS7 698 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 CBWD5Q5RIA9 395 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 PRAMEF17Q5VTA0 474 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 DENND1BQ6P3S1 775 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 TMEM65Q6PI78 240 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 SLC39A5Q6ZMH5 540 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 RSRC2Q7L4I2 434 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 MAATS1Q7Z4T9 603 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 BCDIN3DQ7Z5W3 292 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 SRRM1Q8IYB3 904 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 LAS2Q8IYD9 372 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 MAFAQ8NHW3 353 aaPredicted RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 ARRDC3Q96B67 414 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 RBM17Q96I25 401 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 CCDC17Q96LX7 622 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 ELOVL1Q9BW60 279 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 MAFFQ9ULX9 164 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 TBX20Q9UMR3 447 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 GDAQ9Y2T3 454 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 AFG3L2Q9Y4W6 797 aa4.47□□□□□ -1.69
SMC4-225ENST00000497203 COPG1Q9Y678 874 aaKnown RBP4.47□□□□□ -1.69
SMC4-225ENST00000497203 UBE2Q2LH0YL09 131 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 CLIC1O00299 241 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 FYB1O15117 783 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 KLK10O43240 276 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 GUCY1B2O75343 617 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 GCATO75600 419 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 MBD4O95243 580 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 CPA1P15085 419 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 NDUFS1P28331 727 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 LIFRP42702 1097 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 GEMIN4P57678 1058 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms