RNA–Protein interactions for RNA: ENST00000495462.5

RPN1-206, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-206ENST00000495462 DEPDC4Q8N2C3 294 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 CPXM2Q8N436 756 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 CHCHD4Q8N4Q1 142 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 PNPLA1Q8N8W4 532 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 C1orf216Q8TAB5 229 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 DDI1Q8WTU0 396 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 SLC35F5Q8WV83 523 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 CCDC47Q96A33 483 aaKnown RBP6.73□□□□□ -1.33
RPN1-206ENST00000495462 TOE1Q96GM8 510 aaKnown RBP6.73□□□□□ -1.33
RPN1-206ENST00000495462 GPR174Q9BXC1 333 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 CIPCQ9C0C6 399 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 NUCKS1Q9H1E3 243 aaKnown RBP6.73□□□□□ -1.33
RPN1-206ENST00000495462 TMEM245Q9H330 911 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 PRDM16Q9HAZ2 1276 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 ACP6Q9NPH0 428 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 ITM2CQ9NQX7 267 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 WSB2Q9NYS7 404 aaPredicted RBP6.73□□□□□ -1.33
RPN1-206ENST00000495462 MAN1B1Q9UKM7 699 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 USP24Q9UPU5 2620 aa6.73□□□□□ -1.33
RPN1-206ENST00000495462 TAF4O00268 1085 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 KCNK3O14649 394 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 SLC16A3O15427 465 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 GADD45BO75293 160 aaPredicted RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 NDUFS2O75306 463 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 ZNF217O75362 1048 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 IGLV3-19P01714 112 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 CAPNS1P04632 268 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 EPHX1P07099 455 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 VDRP11473 427 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 CD70P32970 193 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 ACSL1P33121 698 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 HOXD12P35452 270 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 CHKAP35790 457 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 FMO5P49326 533 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 BCAT1P54687 386 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 FKBP3Q00688 224 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 APBA1Q02410 837 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 BST2Q10589 180 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 GRIK2Q13002 908 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 PLEKHG6Q3KR16 790 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 PREPLQ4J6C6 727 aaPredicted RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 SGO2Q562F6 1265 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 FAM133BQ5BKY9 247 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 FSCBQ5H9T9 825 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 KCNT1Q5JUK3 1230 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 DCAF12L1Q5VU92 463 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 TTI2Q6NXR4 508 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 TMEM270Q6UE05 265 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 LCLAT1Q6UWP7 414 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 LAYNQ6UX15 382 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 MMS22LQ6ZRQ5 1243 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 ANKS1BQ7Z6G8 1248 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 KIAA0907Q7Z7F0 614 aaPredicted RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 TADA2BQ86TJ2 420 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 MARCH9Q86YJ5 346 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 ZCCHC9Q8N567 271 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 CCDC150Q8NCX0 1101 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 KCTD13Q8WZ19 329 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 DNASE2BQ8WZ79 361 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 GTPBP3Q969Y2 492 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 PLD4Q96BZ4 506 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 SIPA1Q96FS4 1042 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 MYO19Q96H55 970 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 FAXDC2Q96IV6 333 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 LMLNQ96KR4 655 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 PRICKLE1Q96MT3 831 aaPredicted RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 KREMEN1Q96MU8 473 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 GSDMAQ96QA5 445 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 MED15Q96RN5 788 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 DCLK3Q9C098 648 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 MIS12Q9H081 205 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 MIR1-1HGQ9H1L0 117 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 C6orf106Q9H6K1 298 aaPredicted RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 LRRC4Q9HBW1 653 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 PRSS16Q9NQE7 514 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 ABCB8Q9NUT2 735 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 DNAAF2Q9NVR5 837 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 TJP2Q9UDY2 1190 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 EIF2B4Q9UI10 523 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 CYTH4Q9UIA0 394 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 XPO7Q9UIA9 1087 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 STOML2Q9UJZ1 356 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 INTS6Q9UL03 887 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 STRIP2Q9ULQ0 834 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.72□□□□□ -1.33
RPN1-206ENST00000495462 ZNF510Q9Y2H8 683 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 ASCC3Q8N3C0 2202 aaKnown RBP6.72□□□□□ -1.33
RPN1-206ENST00000495462 AKAP13Q12802 2813 aa6.72□□□□□ -1.33
RPN1-206ENST00000495462 ACACBO00763 2458 aa6.71□□□□□ -1.33
RPN1-206ENST00000495462 CKAP5Q14008 2032 aa6.71□□□□□ -1.33
RPN1-206ENST00000495462 CELSR3Q9NYQ7 3312 aa6.71□□□□□ -1.34
RPN1-206ENST00000495462 A6NJY4 79 aa6.71□□□□□ -1.34
RPN1-206ENST00000495462 SRRM3A6NNA2 597 aaPredicted RBP6.71□□□□□ -1.34
RPN1-206ENST00000495462 METTL12A8MUP2 240 aa6.71□□□□□ -1.34
RPN1-206ENST00000495462 UPK3BL1B0FP48 263 aa6.71□□□□□ -1.34
RPN1-206ENST00000495462 UPK3BL2E5RIL1 263 aa6.71□□□□□ -1.34
RPN1-206ENST00000495462 BIN1O00499 593 aa6.71□□□□□ -1.34
RPN1-206ENST00000495462 CDK2AP1O14519 115 aa6.71□□□□□ -1.34
RPN1-206ENST00000495462 STX10O60499 249 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms