RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 DDX50Q9BQ39 737 aaKnown RBP11.48□□□□□ -0.57
APTX-230ENST00000494649 GOLPH3Q9H4A6 298 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 OR12D3Q9UGF7 316 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 PAXBP1Q9Y5B6 917 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 PCDHA13Q9Y5I0 950 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 EPN1Q9Y6I3 576 aaPredicted RBP11.48□□□□□ -0.57
APTX-230ENST00000494649 RCCD1A6NED2 376 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 WASH3PC4AMC7 463 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 MYO1FO00160 1098 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 NCAM2O15394 837 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 RNF8O76064 485 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 TMEM253P0C7T8 217 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 TNNT1P13805 278 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 DRD1P21728 446 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 IL1R2P27930 398 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 CYLC1P35663 651 aaPredicted RBP11.48□□□□□ -0.57
APTX-230ENST00000494649 GRIA2P42262 883 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 PXNP49023 591 aaPredicted RBP11.48□□□□□ -0.57
APTX-230ENST00000494649 LMAN2Q12907 356 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 MESDQ14696 234 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 EGFLAMQ63HQ2 1017 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 TMTC1Q8IUR5 882 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 CYB5D2Q8WUJ1 264 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 KLHL11Q9NVR0 708 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 HCN2Q9UL51 889 aa11.48□□□□□ -0.57
APTX-230ENST00000494649 REXO2Q9Y3B8 237 aaKnown RBP11.48□□□□□ -0.57
APTX-230ENST00000494649 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 LUC7L3O95232 432 aaKnown RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 DESP17661 470 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 EIF2DP41214 584 aaKnown RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 NOP2P46087 812 aaKnown RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 LRRC32Q14392 662 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 PPP6R3Q5H9R7 873 aaPredicted RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 EFHC2Q5JST6 749 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 RABGAP1LQ5R372 815 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 C1orf228Q6PIY5 440 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 CCDC170Q8IYT3 715 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 ZNF366Q8N895 744 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 ZNF513Q8N8E2 541 aaPredicted RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 NETO2Q8NC67 525 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 HSPH1Q92598 858 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 SNRNP25Q9BV90 132 aaKnown RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 DHX35Q9H5Z1 703 aaKnown RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 GGA2Q9UJY4 613 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 FZD10Q9ULW2 581 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 USP18Q9UMW8 372 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 DUSP10Q9Y6W6 482 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 KIAA1549LQ6ZVL6 1849 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 H0Y858 1186 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 BUB1O43683 1085 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 PRPSAP2O60256 369 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 LRIG2O94898 1065 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 KLF8O95600 359 aaPredicted RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 MZF1P28698 734 aaPredicted RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 CSKP41240 450 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 SATB1Q01826 763 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 FUT11Q495W5 492 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 LRRC31Q6UY01 552 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 CHST9Q7L1S5 443 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 ANKS1BQ7Z6G8 1248 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 ZNF683Q8IZ20 524 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 APCDD1Q8J025 514 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 DTWD2Q8NBA8 298 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 TXNDC5Q8NBS9 432 aaKnown RBP11.47□□□□□ -0.57
APTX-230ENST00000494649 CLDN23Q96B33 292 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 HAPLN3Q96S86 360 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 NDFIP2Q9NV92 336 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 CACNA2D2Q9NY47 1150 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 TRIM10Q9UDY6 481 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 IP6K2Q9UHH9 426 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 DNAI1Q9UI46 699 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 FBXO10Q9UK96 956 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 AP4E1Q9UPM8 1137 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 RAD54BQ9Y620 910 aa11.47□□□□□ -0.57
APTX-230ENST00000494649 CACNA1IQ9P0X4 2223 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 A0A1B0GVM2 712 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 TCAF2A6NFQ2 919 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 EIF3CLB5ME19 914 aaKnown RBP11.46□□□□□ -0.57
APTX-230ENST00000494649 IPO7O95373 1038 aaKnown RBP11.46□□□□□ -0.57
APTX-230ENST00000494649 PABPC1P11940 636 aaKnown RBP11.46□□□□□ -0.57
APTX-230ENST00000494649 FECHP22830 423 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 CTSOP43234 321 aaPredicted RBP11.46□□□□□ -0.57
APTX-230ENST00000494649 KIR2DL1P43626 348 aaPredicted RBP11.46□□□□□ -0.57
APTX-230ENST00000494649 MRE11P49959 708 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 GSE1Q14687 1217 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 ATP13A4Q4VNC1 1196 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 DGKKQ5KSL6 1271 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 HEATR6Q6AI08 1181 aaKnown RBP11.46□□□□□ -0.57
APTX-230ENST00000494649 CYP4V2Q6ZWL3 525 aaPredicted RBP11.46□□□□□ -0.57
APTX-230ENST00000494649 CACUL1Q86Y37 369 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 CCDC117Q8IWD4 279 aaPredicted RBP11.46□□□□□ -0.57
APTX-230ENST00000494649 CHPFQ8IZ52 775 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 IL17RCQ8NAC3 791 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 FNIP1Q8TF40 1166 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 EXOC4Q96A65 974 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 HHIPQ96QV1 700 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 EIF3CQ99613 913 aaKnown RBP11.46□□□□□ -0.57
APTX-230ENST00000494649 OSBPL6Q9BZF3 934 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 CHRDQ9H2X0 955 aa11.46□□□□□ -0.57
APTX-230ENST00000494649 SALL4Q9UJQ4 1053 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms