RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ALDH7A1P49419 539 aaKnown RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 SRRM1Q8IYB3 904 aaKnown RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 ZSCAN18Q8TBC5 510 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 SEPT5Q99719 369 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 GORASP1Q9BQQ3 440 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 BRD8Q9H0E9 1235 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 EIF2B3Q9NR50 452 aaKnown RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 TMEM39AQ9NV64 488 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 IGSF9Q9P2J2 1179 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 WDR27A2RRH5 827 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 RTN3O95197 1032 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 BRAFP15056 766 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 HNRNPH2P55795 449 aaKnown RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 CDK16Q00536 496 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 TAF10Q12962 218 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 PKN2Q16513 984 aaKnown RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 PARP6Q2NL67 630 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 RASIP1Q5U651 963 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 SLC8B1Q6J4K2 584 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 ADGRD1Q6QNK2 874 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 NLRP14Q86W24 1093 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 MPP5Q8N3R9 675 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 PDCD7Q8N8D1 485 aaKnown RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 FBXO22Q8NEZ5 403 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 C2orf15Q8WU43 125 aaKnown RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 FBXO32Q969P5 355 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 LRRC39Q96DD0 335 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 XAB2Q9HCS7 855 aaKnown RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 INTS9Q9NV88 658 aaKnown RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 CLIC5Q9NZA1 410 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 PSMC3IPQ9P2W1 217 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 MTRRQ9UBK8 725 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 HS3ST4Q9Y661 456 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 NYNRINQ9P2P1 1898 aaKnown RBP16.98■□□□□ 0.31
ATG4B-225ENST00000494465 RASA4BC9J798 803 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 RASA4O43374 803 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 SPAG6O75602 509 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 ATP2A2P16615 1042 aaKnown RBP16.98■□□□□ 0.31
ATG4B-225ENST00000494465 MX2P20592 715 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 ITGB8P26012 769 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 HTR7P34969 479 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 NRG1Q02297 640 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-225ENST00000494465 KLHL38Q2WGJ6 581 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 RWDD4Q6NW29 188 aaKnown RBP16.98■□□□□ 0.31
ATG4B-225ENST00000494465 ARHGAP12Q8IWW6 846 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 DCAKDQ8WVC6 231 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 MRRFQ96E11 262 aaKnown RBP16.98■□□□□ 0.31
ATG4B-225ENST00000494465 IGSF21Q96ID5 467 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 CELF6Q96J87 481 aaKnown RBP16.98■□□□□ 0.31
ATG4B-225ENST00000494465 CCT8L2Q96SF2 557 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 PAFAH2Q99487 392 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 FERMT1Q9BQL6 677 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 TTLL3Q9Y4R7 772 aa16.98■□□□□ 0.31
ATG4B-225ENST00000494465 GMNCA6NCL1 334 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 ZNF189O75820 626 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-225ENST00000494465 TBX18O95935 607 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 CLTBP09497 229 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 ATF6P18850 670 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 ZBTB17Q13105 803 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 NR1H3Q13133 447 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 USP41Q3LFD5 358 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 PIK3R6Q5UE93 754 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 C14orf80Q86SX3 495 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 MZB1Q8WU39 189 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 TOP1MTQ969P6 601 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 ZC3H7BQ9UGR2 993 aaKnown RBP16.97■□□□□ 0.31
ATG4B-225ENST00000494465 MOCS2O96007 188 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-225ENST00000494465 RPL17P18621 184 aaKnown RBP16.97■□□□□ 0.31
ATG4B-225ENST00000494465 MLLT6P55198 1093 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-225ENST00000494465 LRRC26Q2I0M4 334 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 KBTBD12Q3ZCT8 623 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 PID1Q7Z2X4 250 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 TMCO2Q7Z6W1 182 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-225ENST00000494465 PRPF39Q86UA1 669 aaKnown RBP16.97■□□□□ 0.31
ATG4B-225ENST00000494465 ZNF683Q8IZ20 524 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 ZNF689Q96CS4 500 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-225ENST00000494465 TBC1D31Q96DN5 1066 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 CFAP36Q96G28 342 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 C1orf74Q96LT6 269 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 CYTH2Q99418 400 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 TRIM56Q9BRZ2 755 aaKnown RBP16.97■□□□□ 0.31
ATG4B-225ENST00000494465 CCDC134Q9H6E4 229 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 RC3H2Q9HBD1 1191 aaKnown RBP16.97■□□□□ 0.31
ATG4B-225ENST00000494465 NDFIP2Q9NV92 336 aa16.97■□□□□ 0.31
ATG4B-225ENST00000494465 E9PAM4 449 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 NDUFAB1O14561 156 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 FAM107AO95990 144 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 ZDHHC11BP0C7U3 371 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 MLNP12872 115 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 CD68P34810 354 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-225ENST00000494465 RFC2P35250 354 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 EFEMP1Q12805 493 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 EBNA1BP2Q99848 306 aaKnown RBP16.96■□□□□ 0.31
ATG4B-225ENST00000494465 KIF9Q9HAQ2 790 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 TMEM51Q9NW97 253 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 COMMD8Q9NX08 183 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 KLHL8Q9P2G9 620 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-225ENST00000494465 BACE2Q9Y5Z0 518 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 FGF10O15520 208 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms