RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 PRLRP16471 622 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 ERCC2P18074 760 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 TAZQ16635 292 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 ALFQ53S48 1182 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 SLC13A5Q86YT5 568 aaPredicted RBP19.97■□□□□ 0.79
USP39-218ENST00000493829 CCDC33Q8N5R6 958 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 FAF2Q96CS3 445 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 TRPV4Q9HBA0 871 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 DUS2Q9NX74 493 aaKnown RBP19.97■□□□□ 0.79
USP39-218ENST00000493829 RCOR3Q9P2K3 495 aaPredicted RBP19.97■□□□□ 0.79
USP39-218ENST00000493829 STOML2Q9UJZ1 356 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 APOL1O14791 398 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 IFNAR2P48551 515 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 NUMBP49757 651 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 NRG1Q02297 640 aaPredicted RBP19.97■□□□□ 0.79
USP39-218ENST00000493829 RABGAP1LQ5R372 815 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 C1orf228Q6PIY5 440 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 NPNTQ6UXI9 565 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 CREG2Q8IUH2 290 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 RASGEF1CQ8N431 466 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 RSAD2Q8WXG1 361 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 P2RY11Q96G91 374 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 RPP25Q9BUL9 199 aaKnown RBP19.97■□□□□ 0.79
USP39-218ENST00000493829 AP1M1Q9BXS5 423 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 ZYG11BQ9C0D3 744 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 PLK2Q9NYY3 685 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 SAE1Q9UBE0 346 aaPredicted RBP19.97■□□□□ 0.79
USP39-218ENST00000493829 MRFAP1Q9Y605 127 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 NUMBLQ9Y6R0 609 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 PDE2AO00408 941 aaPredicted RBP19.96■□□□□ 0.79
USP39-218ENST00000493829 CES2O00748 559 aa19.96■□□□□ 0.79
USP39-218ENST00000493829 TBL1XO60907 577 aa19.96■□□□□ 0.79
USP39-218ENST00000493829 IL9P15248 144 aa19.96■□□□□ 0.79
USP39-218ENST00000493829 PTPN7P35236 360 aa19.96■□□□□ 0.79
USP39-218ENST00000493829 NCBP2-AS2Q69YL0 99 aa19.96■□□□□ 0.79
USP39-218ENST00000493829 FAM217AQ8IXS0 508 aa19.96■□□□□ 0.79
USP39-218ENST00000493829 DDI1Q8WTU0 396 aa19.96■□□□□ 0.79
USP39-218ENST00000493829 EPS15L1Q9UBC2 864 aa19.96■□□□□ 0.79
USP39-218ENST00000493829 CDC23Q9UJX2 597 aa19.96■□□□□ 0.79
USP39-218ENST00000493829 IGLV3-10A0A075B6K4 115 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 MFSD11O43934 449 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 TJP3O95049 919 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 ARSAP15289 507 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 HOXC13P31276 330 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 CHKAP35790 457 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 SMAD2Q15796 467 aaKnown RBP19.95■□□□□ 0.78
USP39-218ENST00000493829 TMCO3Q6UWJ1 677 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 MTSS1LQ765P7 747 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 TMEM25Q86YD3 366 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 YAF2Q8IY57 180 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 NPWQ8N729 165 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 PLD5Q8N7P1 536 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 HJURPQ8NCD3 748 aaPredicted RBP19.95■□□□□ 0.78
USP39-218ENST00000493829 OSCP1Q8WVF1 389 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 ELSPBP1Q96BH3 223 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 PHF7Q9BWX1 381 aaPredicted RBP19.95■□□□□ 0.78
USP39-218ENST00000493829 CATSPERBQ9H7T0 1116 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 NDFIP2Q9NV92 336 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 TBC1D14Q9P2M4 693 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 HEY1Q9Y5J3 304 aa19.95■□□□□ 0.78
USP39-218ENST00000493829 KIF26AQ9ULI4 1882 aaPredicted RBP19.95■□□□□ 0.78
USP39-218ENST00000493829 TYW5A2RUC4 315 aaKnown RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 NEDD8-MDP1E9PL57 170 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 DCLK1O15075 740 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 FGF10O15520 208 aaPredicted RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 PECAM1P16284 738 aaPredicted RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 HCAR3P49019 387 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 ZNF135P52742 658 aaPredicted RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 GBE1Q04446 702 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 HTR4Q13639 388 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 TFDP2Q14188 446 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 ANO4Q32M45 955 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 ACBD5Q5T8D3 534 aaPredicted RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 SLC9A4Q6AI14 798 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 BBS12Q6ZW61 710 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 VSIG1Q86XK7 387 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 CPXM2Q8N436 756 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 ACTRT1Q8TDG2 376 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 ATG4AQ8WYN0 398 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 TMA16Q96EY4 203 aaKnown RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 CELF6Q96J87 481 aaKnown RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 EBF3Q9H4W6 596 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 THG1LQ9NWX6 298 aaKnown RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 OBP2AQ9NY56 170 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 PPARGC1AQ9UBK2 798 aaKnown RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 R3HDM2Q9Y2K5 976 aaKnown RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 UNC80Q8N2C7 3258 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 DRGXA6NNA5 263 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 ZNF487B1APH4 448 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 SLC9A3R1O14745 358 aaPredicted RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 RHOQP17081 205 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 HTR7P34969 479 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 PAFAH1B1P43034 410 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 TNK2Q07912 1038 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 KLF1Q13351 362 aaPredicted RBP19.94■□□□□ 0.78
USP39-218ENST00000493829 EML3Q32P44 896 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 LY6G5CQ5SRR4 150 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 TP53INP2Q8IXH6 220 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 ZDHHC14Q8IZN3 488 aa19.94■□□□□ 0.78
USP39-218ENST00000493829 CARNMT1Q8N4J0 409 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms