RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 GSCP56915 257 aaPredicted RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 TPM4P67936 248 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 CDR2Q01850 454 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 TAF12Q16514 161 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 ARHGAP44Q17R89 818 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 GOLGA7BQ2TAP0 167 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 HECTD3Q5T447 861 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 GPR158Q5T848 1215 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 VITQ6UXI7 678 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 GET4Q7L5D6 327 aaPredicted RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 GAS2L3Q86XJ1 694 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 PROSER1Q86XN7 944 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 CCNJLQ8IV13 435 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 DRC7Q8IY82 874 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 ARHGAP18Q8N392 663 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 MAB21L3Q8N8X9 362 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 STKLD1Q8NE28 680 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 ZNF397Q8NF99 534 aaPredicted RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 NEK11Q8NG66 645 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 UBA3Q8TBC4 463 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 UBXN4Q92575 508 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 MRPS31Q92665 395 aaKnown RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 USP13Q92995 863 aaPredicted RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 FBXO32Q969P5 355 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 SLC22A12Q96S37 553 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 CYP2S1Q96SQ9 504 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 CDK5RAP1Q96SZ6 601 aaKnown RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 DDX23Q9BUQ8 820 aaKnown RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 CLMPQ9H6B4 373 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 LIN7BQ9HAP6 207 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 NMUR1Q9HB89 426 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 TLR8Q9NR97 1041 aaKnown RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 FAM207AQ9NSI2 230 aaPredicted RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 TMEM51Q9NW97 253 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 ASNSD1Q9NWL6 643 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 ZSCAN32Q9NX65 697 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 GMPR2Q9P2T1 348 aaKnown RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 CHORDC1Q9UHD1 332 aaPredicted RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 CAPN11Q9UMQ6 739 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 MAGED2Q9UNF1 606 aaPredicted RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 PTPRQQ9UMZ3 2332 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 A0A0A0MRY4 1105 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 TRAV19A0A0A6YYK7 116 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 TMEM238LA0A1B0GVL6 79 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 E2F8A0AVK6 867 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 HEPACAM2A8MVW5 462 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 PAPSS1O43252 624 aaPredicted RBP7.04□□□□□ -1.28
VPS52-219ENST00000493379 COCHO43405 550 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 LAMTOR5O43504 91 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 PRAMEF12O95522 483 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 SERPINC1P01008 464 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 CALCAP01258 141 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 CCDC172P0C7W6 258 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 KRT5P13647 590 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 KRT9P35527 623 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 AVPR1AP37288 418 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 VIPR2P41587 438 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 NOVA1P51513 510 aaKnown RBP7.04□□□□□ -1.28
VPS52-219ENST00000493379 NRLP54845 237 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 STARD6P59095 220 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 DAOAP59103 153 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 GPC5P78333 572 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 CYP4F8P98187 520 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 FMO1Q01740 532 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 RAPGEF1Q13905 1077 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 SF3A2Q15428 464 aaKnown RBP7.04□□□□□ -1.28
VPS52-219ENST00000493379 ZNF77Q15935 545 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 CSRP2Q16527 193 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 ZNF528Q3MIS6 628 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 AASDHQ4L235 1098 aaPredicted RBP7.04□□□□□ -1.28
VPS52-219ENST00000493379 ARHGAP29Q52LW3 1261 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 MSANTD2Q6P1R3 559 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 DENND1BQ6P3S1 775 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 HTR3DQ70Z44 454 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 NOP9Q86U38 636 aaKnown RBP7.04□□□□□ -1.28
VPS52-219ENST00000493379 ZDHHC17Q8IUH5 632 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 ADGRG2Q8IZP9 1017 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 ARL14EPQ8N8R7 260 aaPredicted RBP7.04□□□□□ -1.28
VPS52-219ENST00000493379 C1orf131Q8NDD1 294 aaKnown RBP7.04□□□□□ -1.28
VPS52-219ENST00000493379 RIN3Q8TB24 985 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 BPIFB1Q8TDL5 484 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 RSAD2Q8WXG1 361 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 ING5Q8WYH8 240 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 DNASE1L2Q92874 299 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 NT5C3BQ969T7 300 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 OTUB2Q96DC9 234 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 NSUN5Q96P11 429 aaKnown RBP7.04□□□□□ -1.28
VPS52-219ENST00000493379 GCNAQ96QF7 691 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 TRMT61BQ9BVS5 477 aaKnown RBP7.04□□□□□ -1.28
VPS52-219ENST00000493379 GMIPQ9P107 970 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 STOML2Q9UJZ1 356 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 PPM1HQ9ULR3 514 aa7.04□□□□□ -1.28
VPS52-219ENST00000493379 FBN3Q75N90 2809 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 A0A1W2PQH9 124 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 TCRBV5S1A1TA0A578 114 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 YJEFN3A6XGL0 299 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 E7ENQ6 273 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 M0QYV0 167 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 GFRA2O00451 464 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 PES1O00541 588 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms