RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 SORBS1Q9BX66 1292 aaKnown RBP5.05□□□□□ -1.6
RTN4-215ENST00000491592 TEX13BQ9BXU2 312 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 REXO4Q9GZR2 422 aaKnown RBP5.05□□□□□ -1.6
RTN4-215ENST00000491592 GSTO2Q9H4Y5 243 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 RABEP2Q9H5N1 569 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 ZMAT3Q9HA38 289 aaKnown RBP5.05□□□□□ -1.6
RTN4-215ENST00000491592 TCF7L2Q9NQB0 619 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.05□□□□□ -1.6
RTN4-215ENST00000491592 DDX19AQ9NUU7 478 aaKnown RBP5.05□□□□□ -1.6
RTN4-215ENST00000491592 CFAP97Q9P2B7 532 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 CHORDC1Q9UHD1 332 aaPredicted RBP5.05□□□□□ -1.6
RTN4-215ENST00000491592 ZDHHC8Q9ULC8 765 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 SORCS3Q9UPU3 1222 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 CHST2Q9Y4C5 530 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 PCDHGB5Q9Y5G0 923 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 PCDHA1Q9Y5I3 950 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 LRRC7Q96NW7 1537 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 TULP4Q9NRJ4 1543 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 CACNA1FO60840 1977 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 CDK12Q9NYV4 1490 aaPredicted RBP5.05□□□□□ -1.6
RTN4-215ENST00000491592 CLTCQ00610 1675 aaKnown RBP5.05□□□□□ -1.6
RTN4-215ENST00000491592 MROH1Q8NDA8 1641 aa5.05□□□□□ -1.6
RTN4-215ENST00000491592 A0A1W2PP64 1363 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 XDHP47989 1333 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 ZNF785A8K8V0 405 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 DIRC3C9JPN6 131 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 NOL3O60936 208 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 STAM2O75886 525 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 MATN4O95460 622 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 OPN1MWP04001 364 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 QDPRP09417 244 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 OPN1MW2P0DN77 364 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 OPN1MW3P0DN78 364 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 PCP11498 1178 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 PORP16435 677 aaPredicted RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 GAP43P17677 238 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 TNFRSF1AP19438 455 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 TFEBP19484 476 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 ZNF75DP51815 510 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 TKTL1P51854 596 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 ITGA8P53708 1063 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 TPM4P67936 248 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 MECOMQ03112 1051 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 KLHL30Q0D2K2 578 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 GALNT1Q10472 559 aaPredicted RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 GPS2Q13227 327 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 PRPF4BQ13523 1007 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 EFR3AQ14156 821 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 FGL2Q14314 439 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 SMAD1Q15797 465 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 PFKFB4Q16877 469 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 USP39Q53GS9 565 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 C1orf141Q5JVX7 400 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 METRNLQ641Q3 311 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 ZSCAN25Q6NSZ9 544 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 SARM1Q6SZW1 724 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 RNF207Q6ZRF8 634 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 RBM43Q6ZSC3 357 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 MAEAQ7L5Y9 396 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 CCDC186Q7Z3E2 898 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 GDF7Q7Z4P5 450 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 PLA2G4DQ86XP0 818 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 ZFPM1Q8IX07 1006 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 C16orf71Q8IYS4 520 aaPredicted RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 C17orf53Q8N3J3 647 aaPredicted RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 TXLNBQ8N3L3 684 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 AOPEPQ8N6M6 819 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 TMIEQ8NEW7 156 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 CEP70Q8NHQ1 597 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 RASSF8Q8NHQ8 419 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 IL17DQ8TAD2 202 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 FEM1CQ96JP0 617 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 RMDN2Q96LZ7 410 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 ZNF396Q96N95 335 aaPredicted RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 DCLRE1CQ96SD1 692 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 DDX23Q9BUQ8 820 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 TM6SF1Q9BZW5 370 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 SCAND2PQ9GZW5 306 aaPredicted RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 NT5C3AQ9H0P0 336 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 SYNCQ9H7C4 482 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 PNPLA8Q9NP80 782 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 SARS2Q9NP81 518 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 CNNM1Q9NRU3 951 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 EXOC1Q9NV70 894 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 TRPM5Q9NZQ8 1165 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 KIF17Q9P2E2 1029 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 EXTL2Q9UBQ6 330 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 ADD3Q9UEY8 706 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 SRRDQ9UH36 339 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 HOOK1Q9UJC3 728 aaKnown RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 SLC45A2Q9UMX9 530 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 ARHGAP26Q9UNA1 814 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 CNPY2Q9Y2B0 182 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 CAB39Q9Y376 341 aaPredicted RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 USP15Q9Y4E8 981 aaPredicted RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 AP1M2Q9Y6Q5 423 aa5.04□□□□□ -1.6
RTN4-215ENST00000491592 V9GYY5 206 aaPredicted RBP5.04□□□□□ -1.6
RTN4-215ENST00000491592 DLG5Q8TDM6 1919 aa5.03□□□□□ -1.6
RTN4-215ENST00000491592 SALL3Q9BXA9 1300 aa5.03□□□□□ -1.6
RTN4-215ENST00000491592 A0A1W2PPL8 197 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms