RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 MED13Q9UHV7 2174 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 A0A1W2PQH9 124 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 K7ESM1 405 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 PLD2O14939 933 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 TCEA3O75764 348 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 AP1G2O75843 785 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 BEST1O76090 585 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 DLDP09622 509 aaKnown RBP15.71■□□□□ 0.11
UFD1-209ENST00000489406 PDX1P52945 283 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 HYIQ5T013 277 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 MBLAC2Q68D91 279 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 KLHDC10Q6PID8 442 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 FBXO39Q8N4B4 442 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 AADATQ8N5Z0 425 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 ZMIZ2Q8NF64 920 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 TPCN2Q8NHX9 752 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 SMARCD1Q96GM5 515 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 CDK5RAP3Q96JB5 506 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 DCLK3Q9C098 648 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 KRT82Q9NSB4 513 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 INTS13Q9NVM9 706 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 ACSL6Q9UKU0 697 aa15.71■□□□□ 0.11
UFD1-209ENST00000489406 JAK2O60674 1132 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 KRT18P05783 430 aaKnown RBP15.7■□□□□ 0.1
UFD1-209ENST00000489406 ATP5BP06576 529 aaKnown RBP15.7■□□□□ 0.1
UFD1-209ENST00000489406 HGFP14210 728 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 GOT1P17174 413 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 GRNP28799 593 aaKnown RBP15.7■□□□□ 0.1
UFD1-209ENST00000489406 UGT1A5P35504 534 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 PDE4CQ08493 712 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 KCNMA1Q12791 1236 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 DYMQ7RTS9 669 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 SKAP1Q86WV1 359 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
UFD1-209ENST00000489406 SMOQ99835 787 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 TM6SF1Q9BZW5 370 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 TUBD1Q9UJT1 453 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 GGA2Q9UJY4 613 aa15.7■□□□□ 0.1
UFD1-209ENST00000489406 NEMP2A6NFY4 417 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 SCAMP1O15126 338 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 PRPF6O94906 941 aaKnown RBP15.69■□□□□ 0.1
UFD1-209ENST00000489406 TNNC2P02585 160 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 KRT7P08729 469 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 HOXD9P28356 352 aaPredicted RBP15.69■□□□□ 0.1
UFD1-209ENST00000489406 PSMD8P48556 350 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 MAP3K7CLP57077 242 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 GNL2Q13823 731 aaKnown RBP15.69■□□□□ 0.1
UFD1-209ENST00000489406 DRAP1Q14919 205 aaPredicted RBP15.69■□□□□ 0.1
UFD1-209ENST00000489406 DTHD1Q6ZMT9 781 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 AHI1Q8N157 1196 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 CPXM2Q8N436 756 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 DUSP23Q9BVJ7 150 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 SYNDIG1Q9H7V2 258 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 EPB41L5Q9HCM4 733 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 CYTH4Q9UIA0 394 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 RASAL2Q9UJF2 1139 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 SCML2Q9UQR0 700 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 DMTF1Q9Y222 760 aa15.69■□□□□ 0.1
UFD1-209ENST00000489406 TBCAO75347 108 aaKnown RBP15.68■□□□□ 0.1
UFD1-209ENST00000489406 LDHAP00338 332 aaKnown RBP15.68■□□□□ 0.1
UFD1-209ENST00000489406 PABPC1P11940 636 aaKnown RBP15.68■□□□□ 0.1
UFD1-209ENST00000489406 POLR2EP19388 210 aaKnown RBP15.68■□□□□ 0.1
UFD1-209ENST00000489406 DDIT3P35638 169 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 MLLT10P55197 1068 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 COG7P83436 770 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 KCNA1Q09470 495 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 WDR72Q3MJ13 1102 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 MPPE1Q53F39 396 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 ZNF542PQ5EBM4 170 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 PERM1Q5SV97 790 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 DIEXFQ68CQ4 756 aaKnown RBP15.68■□□□□ 0.1
UFD1-209ENST00000489406 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.68■□□□□ 0.1
UFD1-209ENST00000489406 RAB11FIP2Q7L804 512 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 GPRIN1Q7Z2K8 1008 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 ZFAND4Q86XD8 727 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 KCTD17Q8N5Z5 321 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 C9orf43Q8TAL5 461 aaPredicted RBP15.68■□□□□ 0.1
UFD1-209ENST00000489406 MYOCQ99972 504 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 NAGPAQ9UK23 515 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 NOL7Q9UMY1 257 aaKnown RBP15.68■□□□□ 0.1
UFD1-209ENST00000489406 PCDHB11Q9Y5F2 797 aa15.68■□□□□ 0.1
UFD1-209ENST00000489406 SPENQ96T58 3664 aaKnown RBP15.68■□□□□ 0.1
UFD1-209ENST00000489406 FBN3Q75N90 2809 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 SLC12A8A0AV02 714 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 PRAMEF26H0Y7S4 382 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 SEMA7AO75326 666 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 CST3P01034 146 aaPredicted RBP15.67■□□□□ 0.1
UFD1-209ENST00000489406 FAM163BP0C2L3 166 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 GNLYP22749 145 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 TNNC1P63316 161 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 EFEMP1Q12805 493 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 SPIDRQ14159 915 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 DUOXA2Q1HG44 320 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 HNRNPA1L2Q32P51 320 aaKnown RBP15.67■□□□□ 0.1
UFD1-209ENST00000489406 ZCCHC8Q6NZY4 707 aaKnown RBP15.67■□□□□ 0.1
UFD1-209ENST00000489406 KIAA0907Q7Z7F0 614 aaPredicted RBP15.67■□□□□ 0.1
UFD1-209ENST00000489406 DSG4Q86SJ6 1040 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 FUKQ8N0W3 1084 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 JAKMIP2Q96AA8 810 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 MYO19Q96H55 970 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms