RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 P2RY11Q96G91 374 aa12.04□□□□□ -0.48
HDAC6-233ENST00000489352 SMARCD1Q96GM5 515 aa12.04□□□□□ -0.48
HDAC6-233ENST00000489352 PLIN2Q99541 437 aa12.04□□□□□ -0.48
HDAC6-233ENST00000489352 MRPL45Q9BRJ2 306 aaKnown RBP12.04□□□□□ -0.48
HDAC6-233ENST00000489352 DPEP3Q9H4B8 488 aa12.04□□□□□ -0.48
HDAC6-233ENST00000489352 ZSWIM6Q9HCJ5 1215 aa12.04□□□□□ -0.48
HDAC6-233ENST00000489352 ABCB8Q9NUT2 735 aa12.04□□□□□ -0.48
HDAC6-233ENST00000489352 SEL1LQ9UBV2 794 aa12.04□□□□□ -0.48
HDAC6-233ENST00000489352 SIX4Q9UIU6 781 aa12.04□□□□□ -0.48
HDAC6-233ENST00000489352 STYXL1Q9Y6J8 313 aa12.04□□□□□ -0.48
HDAC6-233ENST00000489352 UBE4BO95155 1302 aa12.04□□□□□ -0.48
HDAC6-233ENST00000489352 FAM92AA1XBS5 289 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 LATO43561 262 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 AP1G2O75843 785 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 GNLYP22749 145 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 UQCRFS1P47985 274 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 RPIAP49247 311 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 PGFP49763 221 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 ADPRHP54922 357 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 SLC12A3P55017 1021 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 TNNC1P63316 161 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 KLRB1Q12918 225 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 MPPE1Q53F39 396 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 SETMARQ53H47 684 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-233ENST00000489352 MBLAC2Q68D91 279 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 SCARA3Q6AZY7 606 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 KLHDC10Q6PID8 442 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 LIMS2Q7Z4I7 341 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 DENND1CQ8IV53 801 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 BRSK2Q8IWQ3 736 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 KCTD17Q8N5Z5 321 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 TEX19Q8NA77 164 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 GLMNQ92990 594 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 REEP2Q9BRK0 252 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 CALN1Q9BXU9 219 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 PDRG1Q9NUG6 133 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 DKK3Q9UBP4 350 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 PISDQ9UG56 409 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 GGA2Q9UJY4 613 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 SCN8AQ9UQD0 1980 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 NAV3Q8IVL0 2385 aa12.03□□□□□ -0.48
HDAC6-233ENST00000489352 LY6G6EA0A0G2JKS1 128 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 MUSKO15146 869 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 SIN3BO75182 1162 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 TBCAO75347 108 aaKnown RBP12.02□□□□□ -0.49
HDAC6-233ENST00000489352 TACC1O75410 805 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 NEBLO76041 1014 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 ADH1BP00325 375 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 KLKB1P03952 638 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 GIMD1P0DJR0 217 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 HLA-FP30511 346 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 PSMD8P48556 350 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 HNRNPKP61978 463 aaKnown RBP eCLIP12.02□□□□□ -0.49
HDAC6-233ENST00000489352 PPP2CBP62714 309 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 PPP2CAP67775 309 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 DHX8Q14562 1220 aaKnown RBP12.02□□□□□ -0.49
HDAC6-233ENST00000489352 NR0B2Q15466 257 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 CAPRIN2Q6IMN6 1127 aaKnown RBP12.02□□□□□ -0.49
HDAC6-233ENST00000489352 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-233ENST00000489352 DTHD1Q6ZMT9 781 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 FAM35AQ86V20 835 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 FAM114A1Q8IWE2 563 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 CPXM2Q8N436 756 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 CXorf38Q8TB03 319 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 SAAL1Q96ER3 474 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 FAM84AQ96KN4 292 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 CATSPER2Q96P56 530 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 CDK5RAP1Q96SZ6 601 aaKnown RBP12.02□□□□□ -0.49
HDAC6-233ENST00000489352 MTG2Q9H4K7 406 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 PDE11AQ9HCR9 933 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 DNAJC28Q9NX36 388 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 RASAL2Q9UJF2 1139 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 AGO1Q9UL18 857 aaKnown RBP12.02□□□□□ -0.49
HDAC6-233ENST00000489352 NOL7Q9UMY1 257 aaKnown RBP12.02□□□□□ -0.49
HDAC6-233ENST00000489352 U3KQA8 63 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 PRRC2CQ9Y520 2896 aaKnown RBP12.02□□□□□ -0.49
HDAC6-233ENST00000489352 SDK2Q58EX2 2172 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 SVILO95425 2214 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 MED13LQ71F56 2210 aa12.02□□□□□ -0.49
HDAC6-233ENST00000489352 NYNRINQ9P2P1 1898 aaKnown RBP12.02□□□□□ -0.49
HDAC6-233ENST00000489352 EME2A4GXA9 379 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-233ENST00000489352 PFKFB2O60825 505 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 RNGTTO60942 597 aaKnown RBP12.01□□□□□ -0.49
HDAC6-233ENST00000489352 SEMA7AO75326 666 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 CLSTN1O94985 981 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 FAM163BP0C2L3 166 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 RALAP11233 206 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 PABPC1P11940 636 aaKnown RBP12.01□□□□□ -0.49
HDAC6-233ENST00000489352 HGFP14210 728 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 FDPSP14324 419 aaKnown RBP12.01□□□□□ -0.49
HDAC6-233ENST00000489352 C5AR1P21730 350 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 WNT7BP56706 349 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 DUOXA2Q1HG44 320 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 LACTB2Q53H82 288 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-233ENST00000489352 ARSHQ5FYA8 562 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 C1QL3Q5VWW1 255 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 SV2AQ7L0J3 742 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 ADIPOR2Q86V24 386 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 GPBP1Q86WP2 473 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 ZFAND4Q86XD8 727 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms