RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 FIBINQ8TAL6 211 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 TEKT4Q8WW24 435 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 PPP1R9BQ96SB3 815 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 EPAS1Q99814 870 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 IER2Q9BTL4 223 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 TSGA10Q9BZW7 698 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 FOXQ1Q9C009 403 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 ZYG11BQ9C0D3 744 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 TMPRSS4Q9NRS4 437 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 STIM2Q9P246 746 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 AP4E1Q9UPM8 1137 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 TRIOO75962 3097 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 TECTAO75443 2155 aa16.47■□□□□ 0.23
HDAC7-224ENST00000488927 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-224ENST00000488927 TBC1D3BA6NDS4 549 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 SRGAP2O75044 1071 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 PDGFBP01127 241 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-224ENST00000488927 KRT7P08729 469 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 CISD3P0C7P0 127 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 CHRNB1P11230 501 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 SSR1P43307 286 aaKnown RBP16.46■□□□□ 0.23
HDAC7-224ENST00000488927 CCZ1BP86790 482 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 CCZ1P86791 482 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-224ENST00000488927 KDSRQ06136 332 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 CCDC173Q0VFZ6 552 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 ZNF177Q13360 481 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-224ENST00000488927 SLC12A1Q13621 1099 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 EIF4HQ15056 248 aaKnown RBP16.46■□□□□ 0.23
HDAC7-224ENST00000488927 FSTL4Q6MZW2 842 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 ANKS1BQ7Z6G8 1248 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 C14orf80Q86SX3 495 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 CCDC105Q8IYK2 499 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 ZNF683Q8IZ20 524 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 CCAR2Q8N163 923 aaKnown RBP16.46■□□□□ 0.23
HDAC7-224ENST00000488927 CFAP52Q8N1V2 620 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 PHTF2Q8N3S3 785 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 CARNMT1Q8N4J0 409 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.46■□□□□ 0.23
HDAC7-224ENST00000488927 KCNV2Q8TDN2 545 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 WFIKKN2Q8TEU8 576 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 IGSF8Q969P0 613 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 CLDN23Q96B33 292 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 TBC1D31Q96DN5 1066 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 P2RY11Q96G91 374 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 DESI2Q9BSY9 194 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 DONSONQ9NYP3 566 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 KIAA1522Q9P206 1035 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-224ENST00000488927 ADGRG1Q9Y653 693 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 COL4A3Q01955 1670 aa16.46■□□□□ 0.23
HDAC7-224ENST00000488927 F5P12259 2224 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 TIMM44O43615 452 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 LRIG2O94898 1065 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 CCDC175P0C221 793 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 GGCXP38435 758 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 DMC1Q14565 340 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 MANEALQ5VSG8 457 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 NAIF1Q69YI7 327 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-224ENST00000488927 AHI1Q8N157 1196 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 MYEOVQ96EZ4 313 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 PEBP4Q96S96 227 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 SNRNP25Q9BV90 132 aaKnown RBP16.45■□□□□ 0.22
HDAC7-224ENST00000488927 DHX35Q9H5Z1 703 aaKnown RBP16.45■□□□□ 0.22
HDAC7-224ENST00000488927 LMAN1LQ9HAT1 526 aa16.45■□□□□ 0.22
HDAC7-224ENST00000488927 FBRSL1Q9HCM7 1045 aaKnown RBP16.45■□□□□ 0.22
HDAC7-224ENST00000488927 MTF2Q9Y483 593 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-224ENST00000488927 RCCD1A6NED2 376 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 TMEM110-MUSTN1A8MSY1 372 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 FGF10O15520 208 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-224ENST00000488927 KRT86O43790 486 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 MOCS3O95396 460 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 EGFP01133 1207 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 PABPC1P11940 636 aaKnown RBP16.44■□□□□ 0.22
HDAC7-224ENST00000488927 RHOQP17081 205 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 HLA-FP30511 346 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 HOXC13P31276 330 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 NAP1L1P55209 391 aaKnown RBP16.44■□□□□ 0.22
HDAC7-224ENST00000488927 SLC25A11Q02978 314 aaKnown RBP16.44■□□□□ 0.22
HDAC7-224ENST00000488927 SEMA3BQ13214 749 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 DPYSL2Q16555 572 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 HSF5Q4G112 596 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-224ENST00000488927 C6orf118Q5T5N4 469 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 LRRC38Q5VT99 294 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 C11orf63Q6NUN7 778 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 RWDD4Q6NW29 188 aaKnown RBP16.44■□□□□ 0.22
HDAC7-224ENST00000488927 POLNQ7Z5Q5 900 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 SETD3Q86TU7 594 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-224ENST00000488927 UCMAQ8WVF2 138 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 LACRTQ9GZZ8 138 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 CATSPERBQ9H7T0 1116 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 ZWILCHQ9H900 591 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 C11orf16Q9NQ32 467 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 ABCB8Q9NUT2 735 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 GGA2Q9UJY4 613 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 CLEC4EQ9ULY5 219 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 TBC1D30Q9Y2I9 924 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 STARD13Q9Y3M8 1113 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 SNX10Q9Y5X0 201 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 CUL9Q8IWT3 2517 aa16.44■□□□□ 0.22
HDAC7-224ENST00000488927 FAM86C2PA6NEL3 165 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 FAM72CH0Y354 149 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms