RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RRN3Q9NYV6 651 aa3.67□□□□□ -1.82
CD46-215ENST00000488596 C19orf53Q9UNZ5 99 aaPredicted RBP3.67□□□□□ -1.82
CD46-215ENST00000488596 LZTS1Q9Y250 596 aa3.67□□□□□ -1.82
CD46-215ENST00000488596 AFG3L2Q9Y4W6 797 aa3.67□□□□□ -1.82
CD46-215ENST00000488596 HEMK1Q9Y5R4 338 aaPredicted RBP3.67□□□□□ -1.82
CD46-215ENST00000488596 CNTNAP2Q9UHC6 1331 aa3.67□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3DA0A087WVF3 549 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3IA0A087WXS9 549 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3EA0A087X179 549 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3KA0A087X1G2 549 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3BA6NDS4 549 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3FA6NER0 549 aaPredicted RBP3.66□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3LB9A6J9 549 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 NKX2-8O15522 239 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 HEXIM1O94992 359 aaKnown RBP3.66□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3HP0C7X1 549 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 CKMT1AP12532 417 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 CNTFP26441 200 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 DUSP1P28562 367 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 GRK5P34947 590 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 VPS41P49754 854 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 RBM5P52756 815 aaKnown RBP eCLIP3.66□□□□□ -1.82
CD46-215ENST00000488596 FOXL2P58012 376 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 LINC00205P59089 165 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 WDR5P61964 334 aaKnown RBP3.66□□□□□ -1.82
CD46-215ENST00000488596 RBM6P78332 1123 aaKnown RBP3.66□□□□□ -1.82
CD46-215ENST00000488596 SLC14A1Q13336 389 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 CBFBQ13951 182 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 ADCK5Q3MIX3 580 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 HSP90AB4PQ58FF6 505 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 PXDC1Q5TGL8 231 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3GQ6DHY5 549 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3CQ6IPX1 549 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 KIAA1324Q6UXG2 1013 aaKnown RBP3.66□□□□□ -1.82
CD46-215ENST00000488596 DCDC5Q6ZRR9 648 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 RASGRP2Q7LDG7 609 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 IRF2BP2Q7Z5L9 587 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 C2CD5Q86YS7 1000 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 ZDHHC17Q8IUH5 632 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 HERC6Q8IVU3 1022 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 TBC1D3Q8IZP1 549 aaPredicted RBP3.66□□□□□ -1.82
CD46-215ENST00000488596 SPPL3Q8TCT6 385 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 ADAMTS18Q8TE60 1221 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 AKAP1Q92667 903 aaKnown RBP eCLIP3.66□□□□□ -1.82
CD46-215ENST00000488596 GCC1Q96CN9 775 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 FAR2Q96K12 515 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 UBXN10Q96LJ8 280 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 COG8Q96MW5 612 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 ABHD16BQ9H3Z7 469 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 RMI1Q9H9A7 625 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 KCNK9Q9NPC2 374 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 C9orf78Q9NZ63 289 aaPredicted RBP3.66□□□□□ -1.82
CD46-215ENST00000488596 KLHL13Q9P2N7 655 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 NFU1Q9UMS0 254 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 RCE1Q9Y256 329 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 B3GNT3Q9Y2A9 372 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 UBE2J1Q9Y385 318 aaPredicted RBP3.66□□□□□ -1.82
CD46-215ENST00000488596 WDR17Q8IZU2 1322 aa3.66□□□□□ -1.82
CD46-215ENST00000488596 FAM90A20PA6NIJ5 464 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 E5RJQ4 531 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 PRYO14603 147 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 POLBP06746 335 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 STAT6P42226 847 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 KCNB1Q14721 858 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 CNGA3Q16281 694 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 FBXO47Q5MNV8 452 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 MIS18BP1Q6P0N0 1132 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 CYP26C1Q6V0L0 522 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 RANBP10Q6VN20 620 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 NANOGP1Q8N7R0 232 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 NRACQ8N912 160 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 PRSS3P2Q8NHM4 247 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 GLMPQ8WWB7 406 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 GPR78Q96P69 363 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 ARHGAP39Q9C0H5 1083 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 EBF3Q9H4W6 596 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 PLEKHA2Q9HB19 425 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 RIC8AQ9NPQ8 531 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 ASNSD1Q9NWL6 643 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 TRNAU1APQ9NX07 287 aaKnown RBP3.65□□□□□ -1.83
CD46-215ENST00000488596 GGA3Q9NZ52 723 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 NDUFAF4Q9P032 175 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 SEMA5BQ9P283 1151 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 LMTK3Q96Q04 1460 aa3.65□□□□□ -1.83
CD46-215ENST00000488596 TTC34A8MYJ7 566 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 STX16-NPEPL1H3BU86 382 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 H7C1Q1 480 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 STX16O14662 325 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 CYP3A4P08684 503 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 MATN1P21941 496 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 PAX3P23760 479 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 CCKARP32238 428 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 PLCD1P51178 756 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 RCAN1P53805 252 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 TAS2R50P59544 299 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 ACTR2P61160 394 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 SHC2P98077 582 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 DCTN1Q14203 1278 aa3.64□□□□□ -1.83
CD46-215ENST00000488596 KPNB1Q14974 876 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms