RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PROSCO94903 275 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 APODP05090 189 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 CHRNB1P11230 501 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 IL1R2P27930 398 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 HLA-FP30511 346 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 CD70P32970 193 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 SSR1P43307 286 aaKnown RBP11.4□□□□□ -0.58
UBE4B-210ENST00000488228 VAV2P52735 878 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 SLC25A11Q02978 314 aaKnown RBP11.4□□□□□ -0.58
UBE4B-210ENST00000488228 MTA1Q13330 715 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 FZD5Q13467 585 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 LRRC32Q14392 662 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 PIGHQ14442 188 aaPredicted RBP11.4□□□□□ -0.58
UBE4B-210ENST00000488228 MESDQ14696 234 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 GEN1Q17RS7 908 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 ALFQ53S48 1182 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 KCNT1Q5JUK3 1230 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 ARTNQ5T4W7 220 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 MANEALQ5VSG8 457 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 TTC39BQ5VTQ0 682 aaPredicted RBP11.4□□□□□ -0.58
UBE4B-210ENST00000488228 TXNRD3NBQ6F5E7 133 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 PKN3Q6P5Z2 889 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 ANKS1BQ7Z6G8 1248 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 TFAP2DQ7Z6R9 452 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 SLFN11Q7Z7L1 901 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 KIAA1328Q86T90 577 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 LRRC8AQ8IWT6 810 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 SUGP1Q8IWZ8 645 aaKnown RBP11.4□□□□□ -0.58
UBE4B-210ENST00000488228 RHOT2Q8IXI1 618 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 CCAR2Q8N163 923 aaKnown RBP11.4□□□□□ -0.58
UBE4B-210ENST00000488228 CCDC112Q8NEF3 446 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 ANP32BQ92688 251 aaKnown RBP11.4□□□□□ -0.58
UBE4B-210ENST00000488228 PDLIM2Q96JY6 352 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 HAPLN3Q96S86 360 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 LACRTQ9GZZ8 138 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 DHX35Q9H5Z1 703 aaKnown RBP11.4□□□□□ -0.58
UBE4B-210ENST00000488228 ZWILCHQ9H900 591 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 LUC7LQ9NQ29 371 aaKnown RBP11.4□□□□□ -0.58
UBE4B-210ENST00000488228 ABCB8Q9NUT2 735 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 KLHL11Q9NVR0 708 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 MPP6Q9NZW5 540 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 TRIM10Q9UDY6 481 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 FZD10Q9ULW2 581 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 SIT1Q9Y3P8 196 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 PRRT4C9JH25 899 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 ARHGAP6O43182 974 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 LRIG2O94898 1065 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 CISD3P0C7P0 127 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
UBE4B-210ENST00000488228 DRD1P21728 446 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 GRIA2P42262 883 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 TAS2R40P59535 323 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 LMAN2Q12907 356 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 SEMA3BQ13214 749 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 GAS6Q14393 721 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 FUT11Q495W5 492 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 FSCBQ5H9T9 825 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 MPP7Q5T2T1 576 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 CXorf57Q6NSI4 855 aaKnown RBP11.39□□□□□ -0.59
UBE4B-210ENST00000488228 RWDD4Q6NW29 188 aaKnown RBP11.39□□□□□ -0.59
UBE4B-210ENST00000488228 BMP8AQ7Z5Y6 402 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 OR52K2Q8NGK3 314 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 HSPH1Q92598 858 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 KCTD15Q96SI1 283 aaPredicted RBP11.39□□□□□ -0.59
UBE4B-210ENST00000488228 LRFN3Q9BTN0 628 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 IRX2Q9BZI1 471 aaPredicted RBP11.39□□□□□ -0.59
UBE4B-210ENST00000488228 LMAN1LQ9HAT1 526 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
UBE4B-210ENST00000488228 TMEM51Q9NW97 253 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 DLGAP2Q9P1A6 1054 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 OR12D3Q9UGF7 316 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 SALL4Q9UJQ4 1053 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 GGA2Q9UJY4 613 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 FBXO10Q9UK96 956 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 HYOU1Q9Y4L1 999 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 DUSP10Q9Y6W6 482 aa11.39□□□□□ -0.59
UBE4B-210ENST00000488228 IGLV3-10A0A075B6K4 115 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 TBC1D3BA6NDS4 549 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 H0Y626 953 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 K7EQS6 105 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 BUB1O43683 1085 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 CREB3O43889 395 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 BUB1BO60566 1050 aaPredicted RBP11.38□□□□□ -0.59
UBE4B-210ENST00000488228 PTMAP06454 111 aaKnown RBP11.38□□□□□ -0.59
UBE4B-210ENST00000488228 PABPC1P11940 636 aaKnown RBP11.38□□□□□ -0.59
UBE4B-210ENST00000488228 MAN1A1P33908 653 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 PCK1P35558 622 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 CSKP41240 450 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 NOP2P46087 812 aaKnown RBP11.38□□□□□ -0.59
UBE4B-210ENST00000488228 CLCN5P51795 746 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 AIF1P55008 147 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 NRG1Q02297 640 aaPredicted RBP11.38□□□□□ -0.59
UBE4B-210ENST00000488228 ACAP1Q15027 740 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 TCEAL1Q15170 157 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 C5orf22Q49AR2 442 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 C2orf27AQ580R0 203 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 PPP6R3Q5H9R7 873 aaPredicted RBP11.38□□□□□ -0.59
UBE4B-210ENST00000488228 DGKKQ5KSL6 1271 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 EGFLAMQ63HQ2 1017 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms