RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 THAP9Q9H5L6 903 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 RAVER2Q9HCJ3 691 aaKnown RBP4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 POLD4Q9HCU8 107 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 KCNMB3Q9NPA1 279 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 KMT5AQ9NQR1 393 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 MAN1C1Q9NR34 630 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 C1orf112Q9NSG2 853 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 PANK4Q9NVE7 773 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 OBP2AQ9NY56 170 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 HSFX1Q9UBD0 423 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 CCPG1Q9ULG6 757 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 STXBP5LQ9Y2K9 1186 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 NR2E3Q9Y5X4 410 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 SIPA1L1O43166 1804 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 ABCB11O95342 1321 aa4.64□□□□□ -1.67
TM9SF3-205ENST00000485093 COL2A1P02458 1487 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 A0A1B0GTW7 788 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 MYADML2A6NDP7 307 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 FAM86B1E9PN63 330 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 MSH4O15457 936 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CCP110O43303 1012 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 SUV39H1O43463 412 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CHMP2AO43633 222 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CTNND1O60716 968 aaKnown RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 PLA2G6O60733 806 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 ZBED4O75132 1171 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 FLOT1O75955 427 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 HAUS5O94927 633 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 ZFPL1O95159 310 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 FTLP02792 175 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CD1AP06126 327 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 FAM86B2P0C5J1 330 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 ARP10275 920 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 INSRRP14616 1297 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 HTR1BP28222 390 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CASP14P31944 242 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 ACVRL1P37023 503 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 PBX1P40424 430 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 PPP1R2P41236 205 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 RNASE9P60153 205 aaKnown RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 PSMC6P62333 389 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 OCA2Q04671 838 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 SPP2Q13103 211 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CTTNQ14247 550 aaKnown RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 HERC4Q5GLZ8 1057 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 HYIQ5T013 277 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 UTP14CQ5TAP6 766 aaKnown RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 TTI2Q6NXR4 508 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 MOXD1Q6UVY6 613 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 NPNTQ6UXI9 565 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CATSPER3Q86XQ3 398 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 FAM114A1Q8IWE2 563 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 NELFCDQ8IXH7 590 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CCDC65Q8IXS2 484 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 TMEM132CQ8N3T6 1108 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CSGALNACT2Q8N6G5 542 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 TC2NQ8N9U0 490 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 ZBTB34Q8NCN2 500 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CCDC112Q8NEF3 446 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 OR56A1Q8NGH5 318 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 ETNPPLQ8TBG4 499 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 ZNF483Q8TF39 744 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 ZKSCAN4Q969J2 545 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 PPP1R13BQ96KQ4 1090 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 FAM20AQ96MK3 541 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 TSG101Q99816 390 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 EIF2AK1Q9BQI3 630 aaKnown RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 SLF1Q9BQI6 1058 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 C1orf43Q9BWL3 253 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 NT5C3AQ9H0P0 336 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 RPAP3Q9H6T3 665 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 GEMIN8Q9NWZ8 242 aaKnown RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 RGL1Q9NZL6 768 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 CTTNBP2NLQ9P2B4 639 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 DDX20Q9UHI6 824 aaKnown RBP4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 SORCS3Q9UPU3 1222 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 ZNF541Q9H0D2 1346 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 KDM3AQ9Y4C1 1321 aa4.63□□□□□ -1.67
TM9SF3-205ENST00000485093 ZNF646O15015 1829 aaPredicted RBP4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 GREB1LQ9C091 1923 aaPredicted RBP4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 B4DLN1 442 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 DDX39AO00148 427 aaKnown RBP4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 MYO1FO00160 1098 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 TBX3O15119 743 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 WDR46O15213 610 aaKnown RBP4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 ZSCAN12O43309 604 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 FRS3O43559 492 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 STX10O60499 249 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 RECQL4O94761 1208 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 FGFR1OPO95684 399 aaKnown RBP4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 ICAM1P05362 532 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 MYCLP12524 364 aaPredicted RBP4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 CYP11B2P19099 503 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 EEF1GP26641 437 aaKnown RBP4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 RPA1P27694 616 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 CIITAP33076 1130 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 KRT9P35527 623 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 EPS15P42566 896 aa4.62□□□□□ -1.67
TM9SF3-205ENST00000485093 RAP2BP61225 183 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms