RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 DLDP09622 509 aaKnown RBP13.34□□□□□ -0.27
HDAC1-209ENST00000484305 POLR2EP19388 210 aaKnown RBP13.34□□□□□ -0.27
HDAC1-209ENST00000484305 FLT3P36888 993 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 SCNN1AP37088 669 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 PTGER3P43115 390 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 ZNF165P49910 485 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 COPAP53621 1224 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 CDH18Q13634 790 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 E2F5Q15329 346 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 FNDC3BQ53EP0 1204 aaKnown RBP13.34□□□□□ -0.27
HDAC1-209ENST00000484305 TCEAL6Q6IPX3 200 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 KIAA1324Q6UXG2 1013 aaKnown RBP13.34□□□□□ -0.27
HDAC1-209ENST00000484305 ARMCX6Q7L4S7 300 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 CYP2U1Q7Z449 544 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 CIR1Q86X95 450 aaPredicted RBP13.34□□□□□ -0.27
HDAC1-209ENST00000484305 TMPRSS6Q8IU80 811 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 DEFB119Q8N690 84 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 ZNF557Q8N988 423 aaPredicted RBP13.34□□□□□ -0.27
HDAC1-209ENST00000484305 C12orf50Q8NA57 414 aaPredicted RBP13.34□□□□□ -0.27
HDAC1-209ENST00000484305 SLC30A5Q8TAD4 765 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 TCEAL3Q969E4 200 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 NT5C3BQ969T7 300 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 TTC17Q96AE7 1141 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 PCDHB18PQ96TA0 734 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 PRDM16Q9HAZ2 1276 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 VPS45Q9NRW7 570 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 TMEM59LQ9UK28 342 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 SMTNL1A8MU46 457 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 H0Y626 953 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 I6L893 689 aaPredicted RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 FOXD2O60548 495 aaPredicted RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 PAGE1O75459 146 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 ATP5BP06576 529 aaKnown RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 GGCXP38435 758 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 CSKP41240 450 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 CXCR3P49682 368 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 SULT1E1P49888 294 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 ATXN1P54253 815 aaKnown RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 RPL6Q02878 288 aaKnown RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 AUHQ13825 339 aaKnown RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 KLHL40Q2TBA0 621 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 AASDHQ4L235 1098 aaPredicted RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 TRNP1Q6NT89 227 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 FBXL22Q6P050 247 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 SLC36A4Q6YBV0 504 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 PHLDB2Q86SQ0 1253 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 CCDC117Q8IWD4 279 aaPredicted RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 CCAR2Q8N163 923 aaKnown RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 MSANTD4Q8NCY6 345 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 NETO1Q8TDF5 533 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 PIGKQ92643 395 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 IGSF8Q969P0 613 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 MYO19Q96H55 970 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 TBCBQ99426 244 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 ANLNQ9NQW6 1124 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 TMEM74BQ9NUR3 256 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 RRN3Q9NYV6 651 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 CDV3Q9UKY7 258 aaKnown RBP13.33□□□□□ -0.28
HDAC1-209ENST00000484305 STAP1Q9ULZ2 295 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 HS3ST4Q9Y661 456 aa13.33□□□□□ -0.28
HDAC1-209ENST00000484305 SYCE3A1L190 88 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 PATE3B3GLJ2 98 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 AP5Z1O43299 807 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 ADCY5O95622 1261 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 UNGP13051 313 aaPredicted RBP13.32□□□□□ -0.28
HDAC1-209ENST00000484305 SDHBP21912 280 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 MMP8P22894 467 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 CTSOP43234 321 aaPredicted RBP13.32□□□□□ -0.28
HDAC1-209ENST00000484305 IRAK1P51617 712 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 CENPCQ03188 943 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 DEUP1Q05D60 604 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 CAMK2GQ13555 558 aaPredicted RBP13.32□□□□□ -0.28
HDAC1-209ENST00000484305 IQCB1Q15051 598 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 SLC25A52Q3SY17 297 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 PITRM1Q5JRX3 1037 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 SPDYCQ5MJ68 293 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 DGLUCYQ7Z3D6 616 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 C14orf80Q86SX3 495 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 METTL3Q86U44 580 aaKnown RBP13.32□□□□□ -0.28
HDAC1-209ENST00000484305 CACUL1Q86Y37 369 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 APCDD1Q8J025 514 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 PGAP3Q96FM1 320 aaPredicted RBP13.32□□□□□ -0.28
HDAC1-209ENST00000484305 SIPA1Q96FS4 1042 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 CFAP57Q96MR6 1250 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 RPRD1AQ96P16 312 aaPredicted RBP13.32□□□□□ -0.28
HDAC1-209ENST00000484305 C11orf70Q9BRQ4 267 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 TKTL2Q9H0I9 626 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 SIK2Q9H0K1 926 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 MTG2Q9H4K7 406 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 WDCPQ9H6R7 721 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 PRSS16Q9NQE7 514 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 ITM2CQ9NQX7 267 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 TMPRSS4Q9NRS4 437 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 ARHGEF38Q9NXL2 777 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 KIAA1522Q9P206 1035 aaPredicted RBP13.32□□□□□ -0.28
HDAC1-209ENST00000484305 USP36Q9P275 1121 aaKnown RBP13.32□□□□□ -0.28
HDAC1-209ENST00000484305 VANGL2Q9ULK5 521 aa13.32□□□□□ -0.28
HDAC1-209ENST00000484305 NUMA1Q14980 2115 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 ADAMTS9Q9P2N4 1935 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms