RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 LILRB3O75022 631 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 AGTP01019 485 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 SHBGP04278 402 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 ACRP10323 421 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 CTSAP10619 480 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 ATP2A2P16615 1042 aaKnown RBP11.33□□□□□ -0.6
VTI1A-204ENST00000480057 RHOQP17081 205 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 GARSP41250 739 aaKnown RBP11.33□□□□□ -0.6
VTI1A-204ENST00000480057 SKOR1P84550 965 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 EFEMP1Q12805 493 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 PDIA2Q13087 525 aaKnown RBP11.33□□□□□ -0.6
VTI1A-204ENST00000480057 KYNUQ16719 465 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 CCDC38Q502W7 563 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 DNAJC21Q5F1R6 531 aaKnown RBP11.33□□□□□ -0.6
VTI1A-204ENST00000480057 TNFAIP8L3Q5GJ75 292 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 C10orf120Q5SQS8 335 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 ARTNQ5T4W7 220 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 RASIP1Q5U651 963 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 ANKRD22Q5VYY1 191 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 AFMIDQ63HM1 303 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 NUGGCQ68CJ6 796 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 LRRC31Q6UY01 552 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 KDM7AQ6ZMT4 941 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 C16orf59Q7L2K0 433 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 TDRPQ86YL5 185 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 ZNF683Q8IZ20 524 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 FIBCD1Q8N539 461 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 RTL3Q8N8U3 475 aaKnown RBP11.33□□□□□ -0.6
VTI1A-204ENST00000480057 STKLD1Q8NE28 680 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 CCDC110Q8TBZ0 833 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 GIPC2Q8TF65 315 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 HERVK_113Q902F9 699 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 AZIN2Q96A70 460 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 PPP1R2P1Q96PQ5 205 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 ETNK1Q9HBU6 452 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 XAB2Q9HCS7 855 aaKnown RBP11.33□□□□□ -0.6
VTI1A-204ENST00000480057 UXTQ9UBK9 157 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-204ENST00000480057 DNMT3LQ9UJW3 386 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 LZTS1Q9Y250 596 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 RWDD3Q9Y3V2 267 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 MFHAS1Q9Y4C4 1052 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 YIPF1Q9Y548 306 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 HS3ST4Q9Y661 456 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 ZNF840PA6NDX5 716 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 ERI2A8K979 691 aaKnown RBP11.32□□□□□ -0.6
VTI1A-204ENST00000480057 E9PAM4 449 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 C2CD2LO14523 706 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 RGS16O15492 202 aaPredicted RBP11.32□□□□□ -0.6
VTI1A-204ENST00000480057 TLR5O60602 858 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 SOAT2O75908 522 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 FGF18O76093 207 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 MAP3K6O95382 1288 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 SEC24AO95486 1093 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 ACSL3O95573 720 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 C1RP00736 705 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 LINC00271P0C7V0 271 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 HMGA1P17096 107 aaKnown RBP11.32□□□□□ -0.6
VTI1A-204ENST00000480057 CCNCP24863 283 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 ELF1P32519 619 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 ATP5C1P36542 298 aaKnown RBP11.32□□□□□ -0.6
VTI1A-204ENST00000480057 MAGEA3P43357 314 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 NDST2P52849 883 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 AP1B1Q10567 949 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 WASHC5Q12768 1159 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 TERF2Q15554 542 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 C5orf22Q49AR2 442 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 PIK3R6Q5UE93 754 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 ITPRIPL1Q6GPH6 555 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 TIGD7Q6NT04 549 aaPredicted RBP11.32□□□□□ -0.6
VTI1A-204ENST00000480057 FAM117BQ6P1L5 589 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 OTOP2Q7RTS6 562 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 ITIH5Q86UX2 942 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 CCDC13Q8IYE1 715 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 ZBED8Q8IZ13 594 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 CNPY4Q8N129 248 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 NPWQ8N729 165 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 CCNYQ8ND76 341 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 PYROXD1Q8WU10 500 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 DPF3Q92784 378 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 PWWP2AQ96N64 755 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 LGMNQ99538 433 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 SIK2Q9H0K1 926 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 ZBP1Q9H171 429 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 CYP4F11Q9HBI6 524 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 TMEM248Q9NWD8 314 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 TRPM5Q9NZQ8 1165 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 LGALS13Q9UHV8 139 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 ASB3Q9Y575 518 aa11.32□□□□□ -0.6
VTI1A-204ENST00000480057 TCRBV7S3A2A0A539 114 aa11.31□□□□□ -0.6
VTI1A-204ENST00000480057 SLC12A8A0AV02 714 aa11.31□□□□□ -0.6
VTI1A-204ENST00000480057 DRGXA6NNA5 263 aa11.31□□□□□ -0.6
VTI1A-204ENST00000480057 ZBBXA8MT70 800 aa11.31□□□□□ -0.6
VTI1A-204ENST00000480057 AP3B1O00203 1094 aa11.31□□□□□ -0.6
VTI1A-204ENST00000480057 PSMD3O43242 534 aa11.31□□□□□ -0.6
VTI1A-204ENST00000480057 CDH16O75309 829 aa11.31□□□□□ -0.6
VTI1A-204ENST00000480057 METTL18O95568 372 aa11.31□□□□□ -0.6
VTI1A-204ENST00000480057 RPL17P18621 184 aaKnown RBP11.31□□□□□ -0.6
VTI1A-204ENST00000480057 NR1D1P20393 614 aa11.31□□□□□ -0.6
VTI1A-204ENST00000480057 PTPN3P26045 913 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms