RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 ALG6Q9Y672 507 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 A0A0A6YYK5 440 aaPredicted RBP16.38■□□□□ 0.21
COPS3-207ENST00000477299 KANSL1LA0AUZ9 987 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 DRGXA6NNA5 263 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 STK25O00506 426 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 PRPSAP2O60256 369 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 LRIG2O94898 1065 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 TNNT1P13805 278 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 GLULP15104 373 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 COMTP21964 271 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 HLA-FP30511 346 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 L1CAMP32004 1257 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 CD70P32970 193 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 HADHBP55084 474 aaKnown RBP16.38■□□□□ 0.21
COPS3-207ENST00000477299 PRKCQQ04759 706 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 SEMA3BQ13214 749 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 UBXN2BQ14CS0 331 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 ACAP1Q15027 740 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 ARL13BQ3SXY8 428 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 C5orf22Q49AR2 442 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 TMEM196Q5HYL7 178 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 RNF43Q68DV7 783 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 PNKPQ96T60 521 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 DDX50Q9BQ39 737 aaKnown RBP16.38■□□□□ 0.21
COPS3-207ENST00000477299 LTB4R2Q9NPC1 389 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 LUC7LQ9NQ29 371 aaKnown RBP16.38■□□□□ 0.21
COPS3-207ENST00000477299 POLR3BQ9NW08 1133 aaPredicted RBP16.38■□□□□ 0.21
COPS3-207ENST00000477299 ZNF212Q9UDV6 495 aa16.38■□□□□ 0.21
COPS3-207ENST00000477299 IGLV3-10A0A075B6K4 115 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 FAM170BA6NMN3 283 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 PRRT4C9JH25 899 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 K7EQS6 105 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 CREB3O43889 395 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 CYBBP04839 570 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 CD48P09326 243 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 HOXC13P31276 330 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 MARCKSL1P49006 195 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 CCDC173Q0VFZ6 552 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 GEN1Q17RS7 908 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 EFHC2Q5JST6 749 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 TMEM215Q68D42 235 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 PKN3Q6P5Z2 889 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 ZNF852Q6ZMS4 543 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 TFAP2DQ7Z6R9 452 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 CCAR2Q8N163 923 aaKnown RBP16.37■□□□□ 0.21
COPS3-207ENST00000477299 NETO2Q8NC67 525 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 ARHGEF4Q9NR80 690 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 INTS6Q9UL03 887 aaKnown RBP16.37■□□□□ 0.21
COPS3-207ENST00000477299 PYCARDQ9ULZ3 195 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 GUCA1BQ9UMX6 200 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 PPP2R2CQ9Y2T4 447 aa16.37■□□□□ 0.21
COPS3-207ENST00000477299 NYNRINQ9P2P1 1898 aaKnown RBP16.36■□□□□ 0.21
COPS3-207ENST00000477299 GRID2IPA4D2P6 1211 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 BTNL10A8MVZ5 291 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 LUC7L3O95232 432 aaKnown RBP16.36■□□□□ 0.21
COPS3-207ENST00000477299 KAT7O95251 611 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 DCNP07585 359 aaKnown RBP16.36■□□□□ 0.21
COPS3-207ENST00000477299 CHRNB1P11230 501 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 GOT1P17174 413 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 DGKGP49619 791 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 NAP1L1P55209 391 aaKnown RBP16.36■□□□□ 0.21
COPS3-207ENST00000477299 KIF5AQ12840 1032 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 LMAN2Q12907 356 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 MMRN1Q13201 1228 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 PPP6R3Q5H9R7 873 aaPredicted RBP16.36■□□□□ 0.21
COPS3-207ENST00000477299 GRAMD4Q6IC98 578 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 RWDD4Q6NW29 188 aaKnown RBP16.36■□□□□ 0.21
COPS3-207ENST00000477299 ANKS1BQ7Z6G8 1248 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 MFN1Q8IWA4 741 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 CCDC105Q8IYK2 499 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 APCDD1Q8J025 514 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 PBXIP1Q96AQ6 731 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 XPO6Q96QU8 1125 aaKnown RBP16.36■□□□□ 0.21
COPS3-207ENST00000477299 IRX2Q9BZI1 471 aaPredicted RBP16.36■□□□□ 0.21
COPS3-207ENST00000477299 LMAN1LQ9HAT1 526 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 LZTFL1Q9NQ48 299 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 ABCB8Q9NUT2 735 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 C2orf42Q9NWW7 574 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 CWC15Q9P013 229 aaKnown RBP16.36■□□□□ 0.21
COPS3-207ENST00000477299 DEC1Q9P2X7 70 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 MFHAS1Q9Y4C4 1052 aa16.36■□□□□ 0.21
COPS3-207ENST00000477299 KMT2EQ8IZD2 1858 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 SHROOM3Q8TF72 1996 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 H0Y626 953 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 MAN2B1O00754 1011 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 CCDC175P0C221 793 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 CHRM1P11229 460 aaPredicted RBP16.35■□□□□ 0.21
COPS3-207ENST00000477299 IL4RP24394 825 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 MZF1P28698 734 aaPredicted RBP16.35■□□□□ 0.21
COPS3-207ENST00000477299 MAN1A1P33908 653 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 ARSEP51690 589 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 SEC13P55735 322 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 NRG1Q02297 640 aaPredicted RBP16.35■□□□□ 0.21
COPS3-207ENST00000477299 CCINQ13939 588 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 GAS6Q14393 721 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 BOLA3Q53S33 107 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 RABGAP1LQ5R372 815 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 MPP7Q5T2T1 576 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 CXorf57Q6NSI4 855 aaKnown RBP16.35■□□□□ 0.21
COPS3-207ENST00000477299 LRRC31Q6UY01 552 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms