RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 SLC26A11Q86WA9 606 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 PDLIM2Q96JY6 352 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 GLIS2Q9BZE0 524 aaPredicted RBP18.96■□□□□ 0.63
VARS2-209ENST00000477288 IL1RAPL1Q9NZN1 696 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 ADM5C9JUS6 153 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 CTSEP14091 401 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 VAV1P15498 845 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 POLR2EP19388 210 aaKnown RBP18.96■□□□□ 0.63
VARS2-209ENST00000477288 CD151P48509 253 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 RAD23AP54725 363 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 XRCC4Q13426 336 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 FAM98BQ52LJ0 330 aaKnown RBP18.96■□□□□ 0.63
VARS2-209ENST00000477288 TATDN2Q93075 761 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 RTN3O95197 1032 aaPredicted RBP18.96■□□□□ 0.63
VARS2-209ENST00000477288 CYP20A1Q6UW02 462 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 CENPXA8MT69 81 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 SLCO1B7G3V0H7 640 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 LBPP18428 481 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 MGAT5Q09328 741 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 CYB5D1Q6P9G0 228 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 REPS2Q8NFH8 660 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 SEMA6BQ9H3T3 888 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 SLC9A8Q9Y2E8 581 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 ADGRA3Q8IWK6 1321 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 DIP2BQ9P265 1576 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 HLA-DQA2P01906 255 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 CD44P16070 742 aaKnown RBP18.95■□□□□ 0.62
VARS2-209ENST00000477288 CALB2P22676 271 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 PSEN2P49810 448 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 BCL2L1Q07817 233 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 NOL9Q5SY16 702 aaKnown RBP18.95■□□□□ 0.62
VARS2-209ENST00000477288 PRR23CQ6ZRP0 262 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 SERPINB11Q96P15 392 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 CDC42EP4Q9H3Q1 356 aaKnown RBP18.95■□□□□ 0.62
VARS2-209ENST00000477288 MOXD2PA6NHM9 499 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 MEI4A8MW99 385 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 MPOP05164 745 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 TYMPP19971 482 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 SKIV2L2P42285 1042 aaKnown RBP18.95■□□□□ 0.62
VARS2-209ENST00000477288 ITIH4Q14624 930 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 SETMARQ53H47 684 aaPredicted RBP18.95■□□□□ 0.62
VARS2-209ENST00000477288 SLC30A10Q6XR72 485 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 ZDHHC6Q9H6R6 413 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 OSGEPQ9NPF4 335 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 COQ6Q9Y2Z9 468 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 ADGRB1O14514 1584 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 F8VZ95 297 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 PIK3R1P27986 724 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 KDM7AQ6ZMT4 941 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 SOCS4Q8WXH5 440 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 SENP6Q9GZR1 1112 aaPredicted RBP18.95■□□□□ 0.62
VARS2-209ENST00000477288 STON1Q9Y6Q2 735 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 DNALI1O14645 258 aaPredicted RBP18.95■□□□□ 0.62
VARS2-209ENST00000477288 PPIL2Q13356 520 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 TCEA2Q15560 299 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 PALB2Q86YC2 1186 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 DEFB107AQ8IZN7 70 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 S100A13Q99584 98 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 KIFC1Q9BW19 673 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 LRRIQ1Q96JM4 1722 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 WDR27A2RRH5 827 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 RPN2P04844 631 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 HNRNPH1P31943 449 aaKnown RBP18.95■□□□□ 0.62
VARS2-209ENST00000477288 ERVK-24P63145 666 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 FSCN1Q16658 493 aaKnown RBP18.95■□□□□ 0.62
VARS2-209ENST00000477288 IZUMO2Q6UXV1 221 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 BTN2A1Q7KYR7 527 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 TERB1Q8NA31 727 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 CLEC4MQ9H2X3 399 aaPredicted RBP18.95■□□□□ 0.62
VARS2-209ENST00000477288 TRPV2Q9Y5S1 764 aa18.95■□□□□ 0.62
VARS2-209ENST00000477288 SNPHO15079 494 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 FCGR1AP12314 374 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 DNAJC14Q6Y2X3 702 aaPredicted RBP18.94■□□□□ 0.62
VARS2-209ENST00000477288 FBXO39Q8N4B4 442 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 MIEF2Q96C03 454 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 KAZALD1Q96I82 304 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 RIBC2Q9H4K1 309 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 HS6ST1O60243 411 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 NDUFS2O75306 463 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 SLC1A6P48664 564 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 ALDH5A1P51649 535 aaPredicted RBP18.94■□□□□ 0.62
VARS2-209ENST00000477288 MCL1Q07820 350 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 CDH17Q12864 832 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 ADRM1Q16186 407 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 KLHL17Q6TDP4 642 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 EID3Q8N140 333 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 SUSD6Q92537 303 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 EHD4Q9H223 541 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 MID1IP1Q9NPA3 183 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 CCDC154A6NI56 674 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 SV2AQ7L0J3 742 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 MCOLN3Q8TDD5 553 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 C1QTNF7Q9BXJ2 289 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 SLITRK2Q9H156 845 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 DUSP10Q9Y6W6 482 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 CCDC130P13994 396 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 FBXL19Q6PCT2 694 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 RNF44Q7L0R7 432 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 A1CFQ9NQ94 594 aaKnown RBP18.94■□□□□ 0.62
VARS2-209ENST00000477288 A0A0A6YYK5 440 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms