RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 FBXO43Q4G163 708 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 CXorf57Q6NSI4 855 aaKnown RBP12.86□□□□□ -0.35
APTX-220ENST00000476858 DNAJC24Q6P3W2 148 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 SARM1Q6SZW1 724 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 CHST9Q7L1S5 443 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 SYT13Q7L8C5 426 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 TMC6Q7Z403 805 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 PYROXD2Q8N2H3 581 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 HJURPQ8NCD3 748 aaPredicted RBP12.86□□□□□ -0.35
APTX-220ENST00000476858 FAM172AQ8WUF8 416 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 CENPIQ92674 756 aaPredicted RBP12.86□□□□□ -0.35
APTX-220ENST00000476858 SYN2Q92777 582 aaPredicted RBP12.86□□□□□ -0.35
APTX-220ENST00000476858 HS3ST6Q96QI5 342 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 PRRX2Q99811 253 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 PACSIN1Q9BY11 444 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 TPSD1Q9BZJ3 242 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 MPP6Q9NZW5 540 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 MYO1AQ9UBC5 1043 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 GGA2Q9UJY4 613 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 STAP1Q9ULZ2 295 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 NEU3Q9UQ49 428 aa12.86□□□□□ -0.35
APTX-220ENST00000476858 ARIH1Q9Y4X5 557 aaPredicted RBP12.86□□□□□ -0.35
APTX-220ENST00000476858 WDR87Q6ZQQ6 2873 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 CBFA2T2O43439 604 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 LILRB5O75023 590 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 MFAP3LO75121 409 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 SERPING1P05155 500 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 PABPC1P11940 636 aaKnown RBP12.85□□□□□ -0.35
APTX-220ENST00000476858 TCF4P15884 667 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 ABCB4P21439 1286 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 GPD1P21695 349 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 HNRNPH3P31942 346 aaKnown RBP12.85□□□□□ -0.35
APTX-220ENST00000476858 RDXP35241 583 aaKnown RBP12.85□□□□□ -0.35
APTX-220ENST00000476858 PTPN9P43378 593 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 ZNF75DP51815 510 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 MRPS21P82921 87 aaKnown RBP12.85□□□□□ -0.35
APTX-220ENST00000476858 GFPT1Q06210 699 aaPredicted RBP12.85□□□□□ -0.35
APTX-220ENST00000476858 ZNF234Q14588 700 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 CRY1Q16526 586 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 ASTE1Q2TB18 679 aaPredicted RBP12.85□□□□□ -0.35
APTX-220ENST00000476858 ZNF528Q3MIS6 628 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 PLEKHA7Q6IQ23 1121 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 ANO7Q6IWH7 933 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 ARCQ7LC44 396 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 ANKS1BQ7Z6G8 1248 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 MFN1Q8IWA4 741 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 CCAR2Q8N163 923 aaKnown RBP12.85□□□□□ -0.35
APTX-220ENST00000476858 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.85□□□□□ -0.35
APTX-220ENST00000476858 MSANTD4Q8NCY6 345 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 MDGA1Q8NFP4 955 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 ZNF653Q96CK0 615 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 MYO19Q96H55 970 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 BTBD6Q96KE9 485 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 PEBP4Q96S96 227 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.85□□□□□ -0.35
APTX-220ENST00000476858 TRIM5Q9C035 493 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 CIPCQ9C0C6 399 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 ISCUQ9H1K1 167 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 WDCPQ9H6R7 721 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 GPATCH2LQ9NWQ4 482 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 ZSCAN32Q9NX65 697 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 ELOVL2Q9NXB9 296 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 SLC8A2Q9UPR5 921 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 STARD13Q9Y3M8 1113 aa12.85□□□□□ -0.35
APTX-220ENST00000476858 F5H5T6 163 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 RTN2O75298 545 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 LUC7L3O95232 432 aaKnown RBP12.84□□□□□ -0.35
APTX-220ENST00000476858 CCDC172P0C7W6 258 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 SDC4P31431 198 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 CSKP41240 450 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 ARID5BQ14865 1188 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 CA9Q16790 459 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 MBLAC2Q68D91 279 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 CYP4V2Q6ZWL3 525 aaPredicted RBP12.84□□□□□ -0.35
APTX-220ENST00000476858 ALYREFQ86V81 257 aaKnown RBP12.84□□□□□ -0.35
APTX-220ENST00000476858 FAM160A2Q8N612 972 aaPredicted RBP12.84□□□□□ -0.35
APTX-220ENST00000476858 SUMF1Q8NBK3 374 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 FIBINQ8TAL6 211 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 RLN3Q8WXF3 142 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 FAM122AQ96E09 287 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 ALG14Q96F25 216 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 MRGPRX3Q96LB0 322 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 RPRD1AQ96P16 312 aaPredicted RBP12.84□□□□□ -0.35
APTX-220ENST00000476858 IER2Q9BTL4 223 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 SLC2A11Q9BYW1 496 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 THAP2Q9H0W7 228 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 ABHD10Q9NUJ1 306 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 NDFIP2Q9NV92 336 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 THAP10Q9P2Z0 257 aaPredicted RBP12.84□□□□□ -0.35
APTX-220ENST00000476858 ZNF212Q9UDV6 495 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 CNOT8Q9UFF9 292 aaKnown RBP12.84□□□□□ -0.35
APTX-220ENST00000476858 STON1Q9Y6Q2 735 aa12.84□□□□□ -0.35
APTX-220ENST00000476858 MYO18AQ92614 2054 aaKnown RBP12.84□□□□□ -0.35
APTX-220ENST00000476858 TCRBV21S2A2A0A5A6 115 aa12.83□□□□□ -0.36
APTX-220ENST00000476858 TMEM191CA6NGB0 347 aa12.83□□□□□ -0.36
APTX-220ENST00000476858 E9PAM4 449 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms