RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 SLC6A3Q01959 620 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 ZNF252P-AS1Q0IIN9 211 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 TAF5Q15542 800 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 WDR45BQ5MNZ6 344 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 RFWD3Q6PCD5 774 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 OLFML1Q6UWY5 402 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 SERPINA13PQ6UXR4 307 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 SLC26A9Q7LBE3 791 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 KIAA0907Q7Z7F0 614 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-205ENST00000476387 ERICH1Q86X53 443 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 ZNF677Q86XU0 584 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 TMPRSS6Q8IU80 811 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 DEFB106AQ8N104 65 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 ZNF557Q8N988 423 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-205ENST00000476387 HJURPQ8NCD3 748 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-205ENST00000476387 CADM4Q8NFZ8 388 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 SORCS1Q8WY21 1168 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 PRCCQ92733 491 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-205ENST00000476387 SIPA1Q96FS4 1042 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 SLC2A13Q96QE2 648 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 ERGIC2Q96RQ1 377 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 HSD3B7Q9H2F3 369 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 CD93Q9NPY3 652 aa16.78■□□□□ 0.28
COL1A1-205ENST00000476387 WSB2Q9NYS7 404 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-205ENST00000476387 PCDH15Q96QU1 1955 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 SYNJ2BP-COX16A0A087WUM0 186 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 LRRC10BA6NIK2 292 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 ARHGAP33O14559 1287 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 EPHB6O15197 1021 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 TBL1XO60907 577 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 EPHX1P07099 455 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 SYPP08247 313 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 C7P10643 843 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 GNSP15586 552 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 COPAP53621 1224 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 JAM2P57087 298 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 SEMA3BQ13214 749 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 CAMK2GQ13555 558 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-205ENST00000476387 FAM133BQ5BKY9 247 aaKnown RBP16.77■□□□□ 0.28
COL1A1-205ENST00000476387 PIK3R6Q5UE93 754 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 CCDC117Q8IWD4 279 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-205ENST00000476387 DHX40Q8IX18 779 aaKnown RBP16.77■□□□□ 0.28
COL1A1-205ENST00000476387 AHI1Q8N157 1196 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 HDDC3Q8N4P3 179 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 RNF34Q969K3 372 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 C18orf8Q96DM3 657 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 TOE1Q96GM8 510 aaKnown RBP16.77■□□□□ 0.28
COL1A1-205ENST00000476387 SLC39A13Q96H72 371 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 SLC32A1Q9H598 525 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 FBRSQ9HAH7 460 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 ABCB8Q9NUT2 735 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 DDIT4Q9NX09 232 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 COX16Q9P0S2 106 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 SLC12A6Q9UHW9 1150 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 GGA2Q9UJY4 613 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 PLA2G4CQ9UP65 541 aa16.77■□□□□ 0.28
COL1A1-205ENST00000476387 GOLGA6L7A0A1B0GV03 622 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 SYCE3A1L190 88 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 OPHN1O60890 802 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 IGLV3-25P01717 112 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 MMEP08473 750 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 SLC2A3P11169 496 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 PABPC1P11940 636 aaKnown RBP16.76■□□□□ 0.27
COL1A1-205ENST00000476387 SLC6A4P31645 630 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 TPMTP51580 245 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 SGSHP51688 502 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 CDR2Q01850 454 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 ST3GAL2Q16842 350 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 FILIP1LQ4L180 1135 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 FNDC3BQ53EP0 1204 aaKnown RBP16.76■□□□□ 0.27
COL1A1-205ENST00000476387 ZC3H12AQ5D1E8 599 aaKnown RBP16.76■□□□□ 0.27
COL1A1-205ENST00000476387 NAA35Q5VZE5 725 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 NADSYN1Q6IA69 706 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 CHST9Q7L1S5 443 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 APTXQ7Z2E3 356 aaKnown RBP16.76■□□□□ 0.27
COL1A1-205ENST00000476387 PIP4P1Q86T03 277 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 ADIPOR2Q86V24 386 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 CHSY1Q86X52 802 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 RGL4Q8IZJ4 473 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 ATP6V0D2Q8N8Y2 350 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 DEFB124Q8NES8 71 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 ZNF397Q8NF99 534 aaPredicted RBP16.76■□□□□ 0.27
COL1A1-205ENST00000476387 OR2T3Q8NH03 318 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 DNASE2BQ8WZ79 361 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 BTN2A3PQ96KV6 586 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 GTPBP2Q9BX10 602 aaKnown RBP16.76■□□□□ 0.27
COL1A1-205ENST00000476387 PCED1AQ9H1Q7 454 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 TMEM245Q9H330 911 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 DNAAF2Q9NVR5 837 aaKnown RBP16.76■□□□□ 0.27
COL1A1-205ENST00000476387 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.76■□□□□ 0.27
COL1A1-205ENST00000476387 RRN3Q9NYV6 651 aa16.76■□□□□ 0.27
COL1A1-205ENST00000476387 MUC22E2RYF6 1773 aaPredicted RBP16.76■□□□□ 0.27
COL1A1-205ENST00000476387 FAM170AA1A519 330 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 ATP5BP06576 529 aaKnown RBP16.75■□□□□ 0.27
COL1A1-205ENST00000476387 DLDP09622 509 aaKnown RBP16.75■□□□□ 0.27
COL1A1-205ENST00000476387 ACADMP11310 421 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 ABCB4P21439 1286 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 CCR1P32246 355 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 NOS2P35228 1153 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 SCNN1AP37088 669 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms