RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 BHMTQ93088 406 aa19.8■□□□□ 0.76
PSPC1-203ENST00000471658 ASIC4Q96FT7 647 aa19.8■□□□□ 0.76
PSPC1-203ENST00000471658 MAK16Q9BXY0 300 aaKnown RBP19.8■□□□□ 0.76
PSPC1-203ENST00000471658 RCOR3Q9P2K3 495 aaPredicted RBP19.8■□□□□ 0.76
PSPC1-203ENST00000471658 EPS15L1Q9UBC2 864 aa19.8■□□□□ 0.76
PSPC1-203ENST00000471658 ZFP37Q9Y6Q3 630 aaPredicted RBP19.8■□□□□ 0.76
PSPC1-203ENST00000471658 IGLV3-10A0A075B6K4 115 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 CST8O60676 142 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 HOXC13P31276 330 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 PTPN7P35236 360 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 CETN2P41208 172 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 GRM2Q14416 872 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 LONRF2Q1L5Z9 754 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 PTCRAQ6ISU1 281 aaPredicted RBP19.79■□□□□ 0.76
PSPC1-203ENST00000471658 TMEM25Q86YD3 366 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 TDRD5Q8NAT2 981 aaKnown RBP19.79■□□□□ 0.76
PSPC1-203ENST00000471658 RSAD2Q8WXG1 361 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 RPGRIP1Q96KN7 1286 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 NDFIP2Q9NV92 336 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 STIM2Q9P246 746 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 SAE1Q9UBE0 346 aaPredicted RBP19.79■□□□□ 0.76
PSPC1-203ENST00000471658 CDC23Q9UJX2 597 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 NR2E1Q9Y466 385 aa19.79■□□□□ 0.76
PSPC1-203ENST00000471658 UNC80Q8N2C7 3258 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 DCLK1O15075 740 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 SMAD2Q15796 467 aaKnown RBP19.78■□□□□ 0.76
PSPC1-203ENST00000471658 C5orf22Q49AR2 442 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 NPNTQ6UXI9 565 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 TFAP2DQ7Z6R9 452 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 ADGRG2Q8IZP9 1017 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 CPXM2Q8N436 756 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 PLD5Q8N7P1 536 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 ELSPBP1Q96BH3 223 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 HAUS1Q96CS2 278 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 FAM118BQ9BPY3 351 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 DDX50Q9BQ39 737 aaKnown RBP19.78■□□□□ 0.76
PSPC1-203ENST00000471658 PHF7Q9BWX1 381 aaPredicted RBP19.78■□□□□ 0.76
PSPC1-203ENST00000471658 DUS2Q9NX74 493 aaKnown RBP19.78■□□□□ 0.76
PSPC1-203ENST00000471658 OBP2AQ9NY56 170 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 PLK2Q9NYY3 685 aa19.78■□□□□ 0.76
PSPC1-203ENST00000471658 PPARGC1AQ9UBK2 798 aaKnown RBP19.78■□□□□ 0.76
PSPC1-203ENST00000471658 ZNF487B1APH4 448 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 IL9P15248 144 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 ARSAP15289 507 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 KLF1Q13351 362 aaPredicted RBP19.77■□□□□ 0.76
PSPC1-203ENST00000471658 NCBP2-AS2Q69YL0 99 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 SLC9A4Q6AI14 798 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 C1orf228Q6PIY5 440 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 NLRP14Q86W24 1093 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 VSIG1Q86XK7 387 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 MFSD6LQ8IWD5 586 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 TP53INP2Q8IXH6 220 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 CCDC33Q8N5R6 958 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 ACTRT1Q8TDG2 376 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.77■□□□□ 0.76
PSPC1-203ENST00000471658 OSCP1Q8WVF1 389 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 TMA16Q96EY4 203 aaKnown RBP19.77■□□□□ 0.76
PSPC1-203ENST00000471658 ZYG11BQ9C0D3 744 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 TBC1D14Q9P2M4 693 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 TTC7AQ9ULT0 858 aaPredicted RBP19.77■□□□□ 0.76
PSPC1-203ENST00000471658 R3HDM2Q9Y2K5 976 aaKnown RBP19.77■□□□□ 0.76
PSPC1-203ENST00000471658 MRFAP1Q9Y605 127 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 NUMBLQ9Y6R0 609 aa19.77■□□□□ 0.76
PSPC1-203ENST00000471658 TBL1XO60907 577 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 MAP3K6O95382 1288 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 CHKAP35790 457 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 ZNF135P52742 658 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-203ENST00000471658 HTR4Q13639 388 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 SIX1Q15475 284 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-203ENST00000471658 ACBD5Q5T8D3 534 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-203ENST00000471658 BBS12Q6ZW61 710 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 AP1M1Q9BXS5 423 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 ANHXE9PGG2 379 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 PGRMC1O00264 195 aaKnown RBP19.76■□□□□ 0.75
PSPC1-203ENST00000471658 APOL1O14791 398 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 PECAM1P16284 738 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-203ENST00000471658 RHOQP17081 205 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 HTR7P34969 479 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 IFNAR2P48551 515 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 GBE1Q04446 702 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 SLC10A2Q12908 348 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-203ENST00000471658 TFDP2Q14188 446 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 EML3Q32P44 896 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 RABGAP1LQ5R372 815 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 LY6G5CQ5SRR4 150 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 CCDC181Q5TID7 509 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 RHBDF2Q6PJF5 856 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 NPWQ8N729 165 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 RTL3Q8N8U3 475 aaKnown RBP19.76■□□□□ 0.75
PSPC1-203ENST00000471658 DDI1Q8WTU0 396 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 E2F7Q96AV8 911 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 KLC2Q9H0B6 622 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 EBF3Q9H4W6 596 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 CATSPERBQ9H7T0 1116 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 SPHK2Q9NRA0 654 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 ZNF212Q9UDV6 495 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 LIMD1Q9UGP4 676 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 CLEC4EQ9ULY5 219 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 EFR3BQ9Y2G0 817 aa19.76■□□□□ 0.75
PSPC1-203ENST00000471658 SLC9A3R1O14745 358 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms