RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 RAB33AQ14088 237 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 BTG3Q14201 252 aaPredicted RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 FRG1Q14331 258 aaKnown RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 TCTN1Q2MV58 587 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 BBS9Q3SYG4 887 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 TEX44Q53QW1 395 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 TMCO4Q5TGY1 634 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 ANKRD22Q5VYY1 191 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 RNF19BQ6ZMZ0 732 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.47□□□□□ -0.73
MSH5-213ENST00000468136 ZNF771Q7L3S4 317 aaPredicted RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 PRUNE1Q86TP1 453 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 LINC00523Q86TU6 105 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 SPATS2Q86XZ4 545 aaKnown RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 KLHDC8BQ8IXV7 354 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 COLGALT1Q8NBJ5 622 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 FBXO36Q8NEA4 188 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 CCDC110Q8TBZ0 833 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 ADAM32Q8TC27 787 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 CASP10Q92851 521 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 ARHGEF2Q92974 986 aaKnown RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 SEPT5Q99719 369 aaPredicted RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 CCDC134Q9H6E4 229 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 NMUR1Q9HB89 426 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 IL23AQ9NPF7 189 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 MARCH2Q9P0N8 246 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 GMIPQ9P107 970 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 KLHL8Q9P2G9 620 aaPredicted RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 ZNF180Q9UJW8 692 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 SMG5Q9UPR3 1016 aaKnown RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 AAR2Q9Y312 384 aaKnown RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 PCDHB12Q9Y5F1 795 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 CDY1Q9Y6F8 540 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 IKBKGQ9Y6K9 419 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 IGLV3-10A0A075B6K4 115 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 IQANK1A0A1B0GTG1 560 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 SDR42E2A6NKP2 422 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 E9PAM4 449 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 CACNG3O60359 315 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 ANXA9O76027 345 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 UPP2O95045 317 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 LATS1O95835 1130 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 CPP00450 1065 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 MYCP01106 439 aaPredicted RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 HSPA8P11142 646 aaKnown RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 VAV1P15498 845 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 CNTFP26441 200 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 GBP2P32456 591 aaPredicted RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 ELF1P32519 619 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 HPDP32754 393 aaPredicted RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 ATP5C1P36542 298 aaKnown RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 MSH2P43246 934 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 MAPKAPK2P49137 400 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 SERPINB9P50453 376 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 ARPP19P56211 112 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 YBEYP58557 167 aaPredicted RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 WDR5P61964 334 aaKnown RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 DMTNQ08495 405 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 WASHC5Q12768 1159 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 PABPC1LQ4VXU2 614 aaKnown RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 C10orf120Q5SQS8 335 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 FNBP1LQ5T0N5 605 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 AFMIDQ63HM1 303 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 RWDD4Q6NW29 188 aaKnown RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 ADGRD1Q6QNK2 874 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 PID1Q7Z2X4 250 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 ITIH5Q86UX2 942 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 CCDC117Q8IWD4 279 aaPredicted RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 UMODL1-AS1Q8N2C9 162 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 SH2D3CQ8N5H7 860 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 ATPAF2Q8N5M1 289 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 EPS8L3Q8TE67 593 aaKnown RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 NSMCE1Q8WV22 266 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 PLD4Q96BZ4 506 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 MTBPQ96DY7 904 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 SGSM3Q96HU1 749 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 PAWRQ96IZ0 340 aaKnown RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 PGLYRP2Q96PD5 576 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 LGMNQ99538 433 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 EBNA1BP2Q99848 306 aaKnown RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 DHRS4Q9BTZ2 278 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 ZYG11BQ9C0D3 744 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 EPN3Q9H201 632 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 GBA3Q9H227 469 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 MRPL17Q9NRX2 175 aaKnown RBP10.46□□□□□ -0.73
MSH5-213ENST00000468136 TMEM248Q9NWD8 314 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 EURLQ9NYK6 297 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 TRPM5Q9NZQ8 1165 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 PRKAG2Q9UGJ0 569 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 DNMT3LQ9UJW3 386 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 RWDD3Q9Y3V2 267 aa10.46□□□□□ -0.73
MSH5-213ENST00000468136 TET1Q8NFU7 2136 aa10.46□□□□□ -0.74
MSH5-213ENST00000468136 VWA8A3KMH1 1905 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 LTBP2Q14767 1821 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 WDR27A2RRH5 827 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 ARHGAP42A6NI28 874 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 DRGXA6NNA5 263 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 FAM72CH0Y354 149 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 MATN3O15232 486 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 TLR5O60602 858 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms