RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 FAR2Q96K12 515 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 KCNK9Q9NPC2 374 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 CD93Q9NPY3 652 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 MAN2B2Q9Y2E5 1009 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 DHHO43323 396 aa5.71□□□□□ -1.5
SMC4-205ENST00000465563 KAT7O95251 611 aa5.71□□□□□ -1.5
SMC4-205ENST00000465563 HOXC6P09630 235 aa5.71□□□□□ -1.5
SMC4-205ENST00000465563 CPA1P15085 419 aa5.71□□□□□ -1.5
SMC4-205ENST00000465563 ROR2Q01974 943 aaKnown RBP5.71□□□□□ -1.5
SMC4-205ENST00000465563 Q5PR19 223 aa5.71□□□□□ -1.5
SMC4-205ENST00000465563 RASGRP3Q8IV61 690 aa5.71□□□□□ -1.5
SMC4-205ENST00000465563 LMLNQ96KR4 655 aa5.71□□□□□ -1.5
SMC4-205ENST00000465563 PAAF1Q9BRP4 392 aa5.71□□□□□ -1.5
SMC4-205ENST00000465563 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.71□□□□□ -1.5
SMC4-205ENST00000465563 MAP6D1Q9H9H5 199 aa5.71□□□□□ -1.5
SMC4-205ENST00000465563 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.71□□□□□ -1.5
SMC4-205ENST00000465563 RGL1Q9NZL6 768 aa5.71□□□□□ -1.5
SMC4-205ENST00000465563 GXYLT2A0PJZ3 443 aa5.7□□□□□ -1.5
SMC4-205ENST00000465563 IFITM10A6NMD0 228 aa5.7□□□□□ -1.5
SMC4-205ENST00000465563 INO80DQ53TQ3 878 aaPredicted RBP5.7□□□□□ -1.5
SMC4-205ENST00000465563 NADSYN1Q6IA69 706 aa5.7□□□□□ -1.5
SMC4-205ENST00000465563 MORC1Q86VD1 984 aa5.7□□□□□ -1.5
SMC4-205ENST00000465563 GPSM1Q86YR5 675 aa5.7□□□□□ -1.5
SMC4-205ENST00000465563 GLIS1Q8NBF1 620 aa5.7□□□□□ -1.5
SMC4-205ENST00000465563 KAT2AQ92830 837 aa5.7□□□□□ -1.5
SMC4-205ENST00000465563 GDF15Q99988 308 aa5.7□□□□□ -1.5
SMC4-205ENST00000465563 SFXN1Q9H9B4 322 aa5.7□□□□□ -1.5
SMC4-205ENST00000465563 TBC1D14Q9P2M4 693 aa5.7□□□□□ -1.5
SMC4-205ENST00000465563 PNMA6EA0A0J9YXQ4 647 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 J3KTA2 159 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 PODXLO00592 558 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 PAPSS2O95340 614 aaPredicted RBP5.69□□□□□ -1.5
SMC4-205ENST00000465563 ITGA5P08648 1049 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 PRIM2P49643 509 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 RASSF2P50749 326 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 ARL13BQ3SXY8 428 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 USP43Q70EL4 1123 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 CTU1Q7Z7A3 348 aaKnown RBP5.69□□□□□ -1.5
SMC4-205ENST00000465563 RBM23Q86U06 439 aaKnown RBP5.69□□□□□ -1.5
SMC4-205ENST00000465563 DGKHQ86XP1 1220 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 WDR75Q8IWA0 830 aaKnown RBP5.69□□□□□ -1.5
SMC4-205ENST00000465563 TXLNBQ8N3L3 684 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 SLC22A17Q8WUG5 538 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 PHF21BQ96EK2 531 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 SEZ6LQ9BYH1 1024 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 KRCC1Q9NPI7 259 aaPredicted RBP5.69□□□□□ -1.5
SMC4-205ENST00000465563 FSCN3Q9NQT6 498 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 CA14Q9ULX7 337 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 EVPLQ92817 2033 aa5.69□□□□□ -1.5
SMC4-205ENST00000465563 TRIP12Q14669 1992 aaPredicted RBP5.68□□□□□ -1.5
SMC4-205ENST00000465563 OR6C75A6NL08 312 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 TAF5LO75529 589 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 DSCR9P59020 149 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 SHC2P98077 582 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 PMPCAQ10713 525 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 C10orf76Q5T2E6 689 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 Q6ZTK2 550 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 KDELC2Q7Z4H8 507 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 ADGRF3Q8IZF5 1079 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 PRR26Q8N8Z3 221 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 URB1-AS1Q96HZ7 61 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 PPP1R10Q96QC0 940 aaKnown RBP5.68□□□□□ -1.5
SMC4-205ENST00000465563 DCLK3Q9C098 648 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 PLAC1Q9HBJ0 212 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 STARD7Q9NQZ5 370 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 HELLSQ9NRZ9 838 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 TNFSF13BQ9Y275 285 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 LMTK3Q96Q04 1460 aa5.68□□□□□ -1.5
SMC4-205ENST00000465563 FAM234BA2RU67 622 aa5.67□□□□□ -1.5
SMC4-205ENST00000465563 NKX2-8O15522 239 aa5.67□□□□□ -1.5
SMC4-205ENST00000465563 CYP1A2P05177 515 aa5.67□□□□□ -1.5
SMC4-205ENST00000465563 LCKP06239 509 aa5.67□□□□□ -1.5
SMC4-205ENST00000465563 RRP1P56182 461 aaKnown RBP5.67□□□□□ -1.5
SMC4-205ENST00000465563 IFIT5Q13325 482 aaKnown RBP5.67□□□□□ -1.5
SMC4-205ENST00000465563 GALNT3Q14435 633 aa5.67□□□□□ -1.5
SMC4-205ENST00000465563 C9orf50Q5SZB4 431 aa5.67□□□□□ -1.5
SMC4-205ENST00000465563 SLC16A12Q6ZSM3 486 aa5.67□□□□□ -1.5
SMC4-205ENST00000465563 EXD3Q8N9H8 876 aa5.67□□□□□ -1.5
SMC4-205ENST00000465563 ZBTB8BQ8NAP8 495 aaPredicted RBP5.67□□□□□ -1.5
SMC4-205ENST00000465563 IL21RQ9HBE5 538 aa5.67□□□□□ -1.5
SMC4-205ENST00000465563 DTNAQ9Y4J8 743 aa5.67□□□□□ -1.5
SMC4-205ENST00000465563 CXorf65A6NEN9 183 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 ALDOAP04075 364 aaKnown RBP5.66□□□□□ -1.5
SMC4-205ENST00000465563 ALDOCP09972 364 aaKnown RBP5.66□□□□□ -1.5
SMC4-205ENST00000465563 GAS1P54826 345 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 RPL36AP83881 106 aaKnown RBP5.66□□□□□ -1.5
SMC4-205ENST00000465563 CRYZQ08257 329 aaKnown RBP5.66□□□□□ -1.5
SMC4-205ENST00000465563 AAK1Q2M2I8 961 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 ALG10Q5BKT4 473 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 ALG10BQ5I7T1 473 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 TMEM88Q6PEY1 159 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 NR2C2APQ86WQ0 139 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 DNASE2BQ8WZ79 361 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 TBCBQ99426 244 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 TXNRD2Q9NNW7 524 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 NCKIPSDQ9NZQ3 722 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 MDFICQ9P1T7 246 aa5.66□□□□□ -1.5
SMC4-205ENST00000465563 BECN2A8MW95 431 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 INAFM1C9JVW0 142 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 MSI1O43347 362 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms