RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 CYP2A6P11509 494 aaPredicted RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 SMARCA1P28370 1054 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 TRPC1P48995 793 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 RBM5P52756 815 aaKnown RBP eCLIP3.41□□□□□ -1.86
CD55-207ENST00000465534 SIGLEC14Q08ET2 396 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 ITPK1Q13572 414 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 IL10RAQ13651 578 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 NPY5RQ15761 445 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 COL28A1Q2UY09 1125 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 C16orf87Q6PH81 154 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 TMEM108Q6UXF1 575 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 MOB2Q70IA6 237 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 ARMC9Q7Z3E5 817 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 ADHFE1Q8IWW8 467 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 ABHD11Q8NFV4 315 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 BADQ92934 168 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 TNPO1Q92973 898 aaKnown RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 CFAP53Q96M91 514 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 DRC1Q96MC2 740 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 CTAGE1Q96RT6 745 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 LZTS2Q9BRK4 669 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 MMTAG2Q9BU76 263 aaKnown RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 SEZ6LQ9BYH1 1024 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 TINAGL1Q9GZM7 467 aaPredicted RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 UBE2ZQ9H832 354 aaPredicted RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 GPR35Q9HC97 309 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 POT1Q9NUX5 634 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 UTP6Q9NYH9 597 aaKnown RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 PI4KBQ9UBF8 816 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 SWAP70Q9UH65 585 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 CNOT7Q9UIV1 285 aaKnown RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 FBXO9Q9UK97 447 aaPredicted RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 ISY1Q9ULR0 285 aaKnown RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 SQORQ9Y6N5 450 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 NOTCH1P46531 2555 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 LOC400499M0QZD8 3231 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 ZNF831Q5JPB2 1677 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 CELSR3Q9NYQ7 3312 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 H0YHG0 523 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 GTPBP1O00178 669 aaKnown RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 CCP110O43303 1012 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 NDUFS2O75306 463 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 CRYABP02511 175 aaKnown RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 KRT10P13645 584 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 MALP21145 153 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 HOXD9P28356 352 aaPredicted RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 ALDH1B1P30837 517 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 TOB1P50616 345 aaPredicted RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 NAP1L1P55209 391 aaKnown RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 SARNPP82979 210 aaKnown RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 SP2Q02086 613 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 C10orf25Q5T742 122 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 MFSD4BQ5TF39 518 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 JAKMIP3Q5VZ66 844 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 LAYNQ6UX15 382 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 OTUD6AQ7L8S5 288 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 C11orf96Q7Z7L8 435 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 PIM3Q86V86 326 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 IQCF2Q8IXL9 164 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 TERB1Q8NA31 727 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 MIGA1Q8NAN2 632 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 FAM184AQ8NB25 1140 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 XAGE5Q8WWM1 108 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 RSPH1Q8WYR4 309 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 VRK1Q99986 396 aaPredicted RBP3.41□□□□□ -1.86
CD55-207ENST00000465534 GLOD4Q9HC38 313 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 MDFICQ9P1T7 246 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 AGAP1Q9UPQ3 857 aa3.41□□□□□ -1.86
CD55-207ENST00000465534 GBF1Q92538 1859 aa3.4□□□□□ -1.86
CD55-207ENST00000465534 TTC3P53804 2025 aa3.4□□□□□ -1.86
CD55-207ENST00000465534 CCDC168Q8NDH2 2452 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 SMAD6O43541 496 aaKnown RBP3.4□□□□□ -1.87
CD55-207ENST00000465534 PARNO95453 639 aaKnown RBP3.4□□□□□ -1.87
CD55-207ENST00000465534 DLDP09622 509 aaKnown RBP3.4□□□□□ -1.87
CD55-207ENST00000465534 TGFB3P10600 412 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 KCNA5P22460 613 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 PSMC4P43686 418 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 TNNT3P45378 269 aaPredicted RBP3.4□□□□□ -1.87
CD55-207ENST00000465534 CCDC15Q0P6D6 951 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 TRAF1Q13077 416 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 TNIP1Q15025 636 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 MAP9Q49MG5 647 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 KHDC1Q4VXA5 237 aaKnown RBP3.4□□□□□ -1.87
CD55-207ENST00000465534 ZNF628Q5EBL2 1059 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 N4BP2L1Q5TBK1 243 aaPredicted RBP3.4□□□□□ -1.87
CD55-207ENST00000465534 GIMAP6Q6P9H5 292 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 LVRNQ6Q4G3 990 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 SLC4A10Q6U841 1118 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 KIRREL2Q6UWL6 708 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 ZNF813Q6ZN06 617 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 ZNF771Q7L3S4 317 aaPredicted RBP3.4□□□□□ -1.87
CD55-207ENST00000465534 CCDC91Q7Z6B0 441 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 TTC7BQ86TV6 843 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 MORC1Q86VD1 984 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 SPATS2Q86XZ4 545 aaKnown RBP3.4□□□□□ -1.87
CD55-207ENST00000465534 TTC30BQ8N4P2 665 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 DCLK2Q8N568 766 aa3.4□□□□□ -1.87
CD55-207ENST00000465534 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.4□□□□□ -1.87
CD55-207ENST00000465534 WDR66Q8TBY9 1149 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms