RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 GDE1Q9NZC3 331 aa12.47□□□□□ -0.41
RAE1-207ENST00000462438 CHORDC1Q9UHD1 332 aaPredicted RBP12.47□□□□□ -0.41
RAE1-207ENST00000462438 SAR1BQ9Y6B6 198 aa12.47□□□□□ -0.41
RAE1-207ENST00000462438 C3orf70A6NLC5 250 aaPredicted RBP12.46□□□□□ -0.41
RAE1-207ENST00000462438 SOX1O00570 391 aaPredicted RBP12.46□□□□□ -0.41
RAE1-207ENST00000462438 COCHO43405 550 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 GRAP2O75791 330 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 L1CAMP32004 1257 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 MANEALQ5VSG8 457 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 MAP7D3Q8IWC1 876 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 GPR152Q8TDT2 470 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 SMG7Q92540 1137 aaKnown RBP12.46□□□□□ -0.41
RAE1-207ENST00000462438 E2F7Q96AV8 911 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 PEBP4Q96S96 227 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 NAP1L3Q99457 506 aaPredicted RBP12.46□□□□□ -0.41
RAE1-207ENST00000462438 DDIT4Q9NX09 232 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 CLEC1BQ9P126 229 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 PPARGC1AQ9UBK2 798 aaKnown RBP12.46□□□□□ -0.41
RAE1-207ENST00000462438 CDC23Q9UJX2 597 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 RAD54BQ9Y620 910 aa12.46□□□□□ -0.41
RAE1-207ENST00000462438 AGPSO00116 658 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 SMNDC1O75940 238 aaKnown RBP eCLIP12.46□□□□□ -0.42
RAE1-207ENST00000462438 FTCDO95954 541 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 ATP1A1P05023 1023 aaKnown RBP12.46□□□□□ -0.42
RAE1-207ENST00000462438 CETN2P41208 172 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 TBX4P57082 545 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 WHAMMP3Q1A5X7 153 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 FAM47EQ6ZV65 393 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 PHLDB2Q86SQ0 1253 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 LONP2Q86WA8 852 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 ATP6V0D2Q8N8Y2 350 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 PRCCQ92733 491 aaPredicted RBP12.46□□□□□ -0.42
RAE1-207ENST00000462438 BTN2A3PQ96KV6 586 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 OSBPL9Q96SU4 736 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 PRDM12Q9H4Q4 367 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 PREBQ9HCU5 417 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 SLC12A6Q9UHW9 1150 aa12.46□□□□□ -0.42
RAE1-207ENST00000462438 IGLV3-10A0A075B6K4 115 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.45□□□□□ -0.42
RAE1-207ENST00000462438 DPPA5A6NC42 116 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 WASH4PA8MWX3 477 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 GFRA2O00451 464 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 PER2O15055 1255 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 SPATA31D3P0C874 917 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 IL1R2P27930 398 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 RNASE9P60153 205 aaKnown RBP12.45□□□□□ -0.42
RAE1-207ENST00000462438 ADGRE1Q14246 886 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 C10orf120Q5SQS8 335 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 Q6ZNB5 142 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 SPATA31D4Q6ZUB0 917 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 ZNF473Q8WTR7 871 aaKnown RBP12.45□□□□□ -0.42
RAE1-207ENST00000462438 RIPOR3Q96MK2 946 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 DDX50Q9BQ39 737 aaKnown RBP12.45□□□□□ -0.42
RAE1-207ENST00000462438 BRD8Q9H0E9 1235 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 MAGED2Q9UNF1 606 aaPredicted RBP12.45□□□□□ -0.42
RAE1-207ENST00000462438 RFXAPO00287 272 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 RFPL2O75678 378 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 APOEP02649 317 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 IMPDH2P12268 514 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 EFHC2Q5JST6 749 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 CPXM2Q8N436 756 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 SUSD6Q92537 303 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 EDEM1Q92611 657 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 RPGRIP1Q96KN7 1286 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 GORASP1Q9BQQ3 440 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 CORO1BQ9BR76 489 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 SNRNP25Q9BV90 132 aaKnown RBP12.45□□□□□ -0.42
RAE1-207ENST00000462438 WDCPQ9H6R7 721 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 CCSER2Q9H7U1 834 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAE1-207ENST00000462438 DOCK4Q8N1I0 1966 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 RARAP10276 462 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 TFE3P19532 575 aaPredicted RBP12.45□□□□□ -0.42
RAE1-207ENST00000462438 SLC7A5Q01650 507 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 ARTNQ5T4W7 220 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 TTC39BQ5VTQ0 682 aaPredicted RBP12.45□□□□□ -0.42
RAE1-207ENST00000462438 HTR3DQ70Z44 454 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 GET4Q7L5D6 327 aaPredicted RBP12.45□□□□□ -0.42
RAE1-207ENST00000462438 HNRNPLLQ8WVV9 542 aaKnown RBP12.45□□□□□ -0.42
RAE1-207ENST00000462438 ALG3Q92685 438 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 OTUB2Q96DC9 234 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 PSMB7Q99436 277 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 STK38LQ9Y2H1 464 aa12.45□□□□□ -0.42
RAE1-207ENST00000462438 CXorf51AA0A1B0GTR3 108 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 GREM1O60565 184 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 KDELR1P24390 212 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 PITX1P78337 314 aaPredicted RBP12.44□□□□□ -0.42
RAE1-207ENST00000462438 KBTBD12Q3ZCT8 623 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 DCAF12L1Q5VU92 463 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 ZNF683Q8IZ20 524 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 KRT35Q92764 455 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 ABTB1Q969K4 478 aaPredicted RBP12.44□□□□□ -0.42
RAE1-207ENST00000462438 PRMT1Q99873 361 aaKnown RBP12.44□□□□□ -0.42
RAE1-207ENST00000462438 MTMR10Q9NXD2 777 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 AP4E1Q9UPM8 1137 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 E2F8A0AVK6 867 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 ZFXP17010 805 aaPredicted RBP12.44□□□□□ -0.42
RAE1-207ENST00000462438 CCR2P41597 374 aa12.44□□□□□ -0.42
RAE1-207ENST00000462438 ATP11AP98196 1134 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms