RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ERCC2P18074 760 aa11□□□□□ -0.65
RTF1-202ENST00000462276 GBP2P32456 591 aaPredicted RBP11□□□□□ -0.65
RTF1-202ENST00000462276 ETFBP38117 255 aa11□□□□□ -0.65
RTF1-202ENST00000462276 NDST2P52849 883 aa11□□□□□ -0.65
RTF1-202ENST00000462276 CDH4P55283 916 aa11□□□□□ -0.65
RTF1-202ENST00000462276 YBEYP58557 167 aaPredicted RBP11□□□□□ -0.65
RTF1-202ENST00000462276 LMNB2Q03252 620 aa11□□□□□ -0.65
RTF1-202ENST00000462276 ZNF33AQ06730 810 aa11□□□□□ -0.65
RTF1-202ENST00000462276 XRCC4Q13426 336 aa11□□□□□ -0.65
RTF1-202ENST00000462276 PAFAH1B3Q15102 231 aaKnown RBP11□□□□□ -0.65
RTF1-202ENST00000462276 CCNG2Q16589 344 aa11□□□□□ -0.65
RTF1-202ENST00000462276 FAM72AQ5TYM5 149 aa11□□□□□ -0.65
RTF1-202ENST00000462276 RAP1GAP2Q684P5 730 aa11□□□□□ -0.65
RTF1-202ENST00000462276 NADSYN1Q6IA69 706 aa11□□□□□ -0.65
RTF1-202ENST00000462276 FAM72DQ6L9T8 149 aa11□□□□□ -0.65
RTF1-202ENST00000462276 RWDD4Q6NW29 188 aaKnown RBP11□□□□□ -0.65
RTF1-202ENST00000462276 DRICH1Q6PGQ1 229 aaPredicted RBP11□□□□□ -0.65
RTF1-202ENST00000462276 ZNF783Q6ZMS7 281 aa11□□□□□ -0.65
RTF1-202ENST00000462276 SETD3Q86TU7 594 aaPredicted RBP11□□□□□ -0.65
RTF1-202ENST00000462276 FAM72BQ86X60 149 aa11□□□□□ -0.65
RTF1-202ENST00000462276 MFSD6LQ8IWD5 586 aa11□□□□□ -0.65
RTF1-202ENST00000462276 LGI2Q8N0V4 545 aa11□□□□□ -0.65
RTF1-202ENST00000462276 PYROXD2Q8N2H3 581 aa11□□□□□ -0.65
RTF1-202ENST00000462276 PLD5Q8N7P1 536 aa11□□□□□ -0.65
RTF1-202ENST00000462276 RTL3Q8N8U3 475 aaKnown RBP11□□□□□ -0.65
RTF1-202ENST00000462276 OSCP1Q8WVF1 389 aa11□□□□□ -0.65
RTF1-202ENST00000462276 P3H4Q92791 437 aa11□□□□□ -0.65
RTF1-202ENST00000462276 HAUS1Q96CS2 278 aa11□□□□□ -0.65
RTF1-202ENST00000462276 RPRD1AQ96P16 312 aaPredicted RBP11□□□□□ -0.65
RTF1-202ENST00000462276 FERMT1Q9BQL6 677 aa11□□□□□ -0.65
RTF1-202ENST00000462276 PHF7Q9BWX1 381 aaPredicted RBP11□□□□□ -0.65
RTF1-202ENST00000462276 HEMGNQ9BXL5 484 aa11□□□□□ -0.65
RTF1-202ENST00000462276 POMKQ9H5K3 350 aa11□□□□□ -0.65
RTF1-202ENST00000462276 KLHL11Q9NVR0 708 aa11□□□□□ -0.65
RTF1-202ENST00000462276 TMEM248Q9NWD8 314 aa11□□□□□ -0.65
RTF1-202ENST00000462276 XPO7Q9UIA9 1087 aaKnown RBP11□□□□□ -0.65
RTF1-202ENST00000462276 VANGL2Q9ULK5 521 aa11□□□□□ -0.65
RTF1-202ENST00000462276 CCL26Q9Y258 94 aa11□□□□□ -0.65
RTF1-202ENST00000462276 CDH23Q9H251 3354 aa11□□□□□ -0.65
RTF1-202ENST00000462276 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.99□□□□□ -0.65
RTF1-202ENST00000462276 CTAGE15A4D2H0 777 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 HEPACAM2A8MVW5 462 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 ANHXE9PGG2 379 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 H3BQ06 376 aaPredicted RBP10.99□□□□□ -0.65
RTF1-202ENST00000462276 KRIT1O00522 736 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 DCLK1O15075 740 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 ZNF185O15231 689 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 MBTPS2O43462 519 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 CTAGE8P0CG41 777 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 KRT10P13645 584 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 FCHO2Q0JRZ9 810 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 NR1H3Q13133 447 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 MMRN1Q13201 1228 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 ZNF177Q13360 481 aaPredicted RBP10.99□□□□□ -0.65
RTF1-202ENST00000462276 PDK1Q15118 436 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 CCDC85BQ15834 202 aaPredicted RBP10.99□□□□□ -0.65
RTF1-202ENST00000462276 CYP1B1Q16678 543 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 AAK1Q2M2I8 961 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 C6orf118Q5T5N4 469 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 KAZNQ674X7 775 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 RNF43Q68DV7 783 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 CTAGE6Q86UF2 777 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 BBS7Q8IWZ6 715 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 CTAGE4Q8IX94 777 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 YAF2Q8IY57 180 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 ZDHHC14Q8IZN3 488 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 ADGRG2Q8IZP9 1017 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 UMODL1-AS1Q8N2C9 162 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 PQLC3Q8N755 202 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 TDRD5Q8NAT2 981 aaKnown RBP10.99□□□□□ -0.65
RTF1-202ENST00000462276 ATP2A3Q93084 1043 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 MYADMQ96S97 322 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 SLC2A11Q9BYW1 496 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 LRRC19Q9H756 370 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 TMPRSS4Q9NRS4 437 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 DUS2Q9NX74 493 aaKnown RBP10.99□□□□□ -0.65
RTF1-202ENST00000462276 MARK1Q9P0L2 795 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 GREB1Q4ZG55 1949 aa10.99□□□□□ -0.65
RTF1-202ENST00000462276 PRUNE2Q8WUY3 3088 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 CXorf51AA0A1B0GTR3 108 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 ILVBLA1L0T0 632 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 GRXCR2A6NFK2 248 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 HACD1B0YJ81 288 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 CHADO15335 359 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 MTSS1O43312 755 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 NFATC1O95644 943 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 ADH1CP00326 375 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 PSMC3P17980 439 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 AMPD1P23109 780 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 SLC6A4P31645 630 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 STIP1P31948 543 aaKnown RBP10.98□□□□□ -0.65
RTF1-202ENST00000462276 CHRNA3P32297 505 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 IFNAR2P48551 515 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 FNTAP49354 379 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 SLC12A1Q13621 1099 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 SMAD2Q15796 467 aaKnown RBP10.98□□□□□ -0.65
RTF1-202ENST00000462276 PARP15Q460N3 678 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 ARTNQ5T4W7 220 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 C14orf80Q86SX3 495 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 NLRP14Q86W24 1093 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms