RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CCDC117Q8IWD4 279 aaPredicted RBP19.61■□□□□ 0.73
VARS-220ENST00000461874 ATP6V0D2Q8N8Y2 350 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 MYO19Q96H55 970 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 GTPBP2Q9BX10 602 aaKnown RBP19.61■□□□□ 0.73
VARS-220ENST00000461874 FAM204AQ9H8W3 233 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 SLC12A6Q9UHW9 1150 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 CEP192Q8TEP8 1941 aa19.61■□□□□ 0.73
VARS-220ENST00000461874 METTL12A8MUP2 240 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 MEI4A8MW99 385 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 GRAP2O75791 330 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 ASLP04424 464 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 ERBB2P04626 1255 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 SLC2A3P11169 496 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 CEACAM1P13688 526 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 RPS14P62263 151 aaKnown RBP19.6■□□□□ 0.73
VARS-220ENST00000461874 DRAP1Q14919 205 aaPredicted RBP19.6■□□□□ 0.73
VARS-220ENST00000461874 PLEKHG6Q3KR16 790 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 PTPN20Q4JDL3 420 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 TCP11X2Q5H9J9 407 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 MMS22LQ6ZRQ5 1243 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 MRGPRX3Q96LB0 322 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 PRMT1Q99873 361 aaKnown RBP19.6■□□□□ 0.73
VARS-220ENST00000461874 PLCB1Q9NQ66 1216 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 DDIT4Q9NX09 232 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 KIAA1522Q9P206 1035 aaPredicted RBP19.6■□□□□ 0.73
VARS-220ENST00000461874 CEP83Q9Y592 693 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 FHOD1Q9Y613 1164 aa19.6■□□□□ 0.73
VARS-220ENST00000461874 CACNA1EQ15878 2313 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 SYNJ2BP-COX16A0A087WUM0 186 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 F5H5T6 163 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 H0Y626 953 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 PES1O00541 588 aaKnown RBP19.59■□□□□ 0.73
VARS-220ENST00000461874 SYPP08247 313 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 ABCB4P21439 1286 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 EEF1GP26641 437 aaKnown RBP19.59■□□□□ 0.73
VARS-220ENST00000461874 CCR1P32246 355 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 ST8SIA6P61647 398 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 SLC6A3Q01959 620 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 ZBTB16Q05516 673 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 SEMA3BQ13214 749 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 RAPGEF1Q13905 1077 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 PITRM1Q5JRX3 1037 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 DCAF12L1Q5VU92 463 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 SLC26A9Q7LBE3 791 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 FAM124AQ86V42 546 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 KDM1BQ8NB78 822 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 DEFB124Q8NES8 71 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 ZNF397Q8NF99 534 aaPredicted RBP19.59■□□□□ 0.73
VARS-220ENST00000461874 NAA15Q9BXJ9 866 aaKnown RBP19.59■□□□□ 0.73
VARS-220ENST00000461874 PCED1AQ9H1Q7 454 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 MTG2Q9H4K7 406 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 SYNCQ9H7C4 482 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 COX16Q9P0S2 106 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 ANGPTL2Q9UKU9 493 aa19.59■□□□□ 0.73
VARS-220ENST00000461874 MUC22E2RYF6 1773 aaPredicted RBP19.58■□□□□ 0.73
VARS-220ENST00000461874 A0A1B0GTW7 788 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 UPK3BL1B0FP48 263 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 UPK3BL2E5RIL1 263 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 OPHN1O60890 802 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 DAB1O75553 588 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 MOCS3O95396 460 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 UCHL3P15374 230 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 CYP11B1P15538 503 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 SHC2P98077 582 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 ARID5BQ14865 1188 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 HNRNPA1L2Q32P51 320 aaKnown RBP19.58■□□□□ 0.72
VARS-220ENST00000461874 PIP4P1Q86T03 277 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 HDDC3Q8N4P3 179 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 MINDY1Q8N5J2 469 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 TMEM35BQ8NCS4 154 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 ENOX1Q8TC92 643 aaKnown RBP19.58■□□□□ 0.72
VARS-220ENST00000461874 RNF34Q969K3 372 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 RSPH9Q9H1X1 276 aaPredicted RBP19.58■□□□□ 0.72
VARS-220ENST00000461874 ERVW-1Q9UQF0 538 aa19.58■□□□□ 0.72
VARS-220ENST00000461874 DNTTP04053 509 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 SRPRAP08240 638 aaKnown RBP19.57■□□□□ 0.72
VARS-220ENST00000461874 ACSL1P33121 698 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 CDH5P33151 784 aaPredicted RBP19.57■□□□□ 0.72
VARS-220ENST00000461874 NOS2P35228 1153 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 CTSOP43234 321 aaPredicted RBP19.57■□□□□ 0.72
VARS-220ENST00000461874 ZNF252P-AS1Q0IIN9 211 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 ZNF776Q68DI1 518 aaPredicted RBP19.57■□□□□ 0.72
VARS-220ENST00000461874 ZDHHC17Q8IUH5 632 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 APCDD1Q8J025 514 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 ZCCHC9Q8N567 271 aaKnown RBP19.57■□□□□ 0.72
VARS-220ENST00000461874 OR2I1PQ8NGU4 316 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 MIR1-1HGQ9H1L0 117 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 PDCL3Q9H2J4 239 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 DNAAF2Q9NVR5 837 aaKnown RBP19.57■□□□□ 0.72
VARS-220ENST00000461874 CEP295Q9C0D2 2601 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 PCDH15Q96QU1 1955 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 PCNX2A6NKB5 2137 aa19.57■□□□□ 0.72
VARS-220ENST00000461874 SIN3BO75182 1162 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 MATKP42679 507 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 ECT2LQ008S8 904 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 NME3Q13232 169 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 MTA1Q13330 715 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 SLC12A1Q13621 1099 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 TTC31Q49AM3 519 aaPredicted RBP19.56■□□□□ 0.72
VARS-220ENST00000461874 RABGAP1LQ5R372 815 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms