RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 ZNF33AQ06730 810 aa18.05■□□□□ 0.48
MRPL28-207ENST00000461550 TRIM61Q5EBN2 209 aa18.05■□□□□ 0.48
MRPL28-207ENST00000461550 FKBP15Q5T1M5 1219 aa18.05■□□□□ 0.48
MRPL28-207ENST00000461550 OTUD1Q5VV17 481 aaPredicted RBP18.05■□□□□ 0.48
MRPL28-207ENST00000461550 SYT12Q8IV01 421 aa18.05■□□□□ 0.48
MRPL28-207ENST00000461550 DHX40Q8IX18 779 aaKnown RBP18.05■□□□□ 0.48
MRPL28-207ENST00000461550 ATP6V0D2Q8N8Y2 350 aa18.05■□□□□ 0.48
MRPL28-207ENST00000461550 EPS8L1Q8TE68 723 aa18.05■□□□□ 0.48
MRPL28-207ENST00000461550 SIPA1Q96FS4 1042 aa18.05■□□□□ 0.48
MRPL28-207ENST00000461550 ADAM33Q9BZ11 813 aa18.05■□□□□ 0.48
MRPL28-207ENST00000461550 IRX2Q9BZI1 471 aaPredicted RBP18.05■□□□□ 0.48
MRPL28-207ENST00000461550 FSCN3Q9NQT6 498 aa18.05■□□□□ 0.48
MRPL28-207ENST00000461550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.05■□□□□ 0.48
MRPL28-207ENST00000461550 C4orf47A7E2U8 309 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 F5H5T6 163 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 H0Y626 953 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 NDUFS2O75306 463 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 LUC7L3O95232 432 aaKnown RBP18.04■□□□□ 0.48
MRPL28-207ENST00000461550 CCR1P32246 355 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 CDH5P33151 784 aaPredicted RBP18.04■□□□□ 0.48
MRPL28-207ENST00000461550 TPMTP51580 245 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 CENPCQ03188 943 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 SYCP1Q15431 976 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 PPM1JQ5JR12 505 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 SMYD5Q6GMV2 418 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 CPA5Q8WXQ8 436 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 PRCCQ92733 491 aaPredicted RBP18.04■□□□□ 0.48
MRPL28-207ENST00000461550 TOE1Q96GM8 510 aaKnown RBP18.04■□□□□ 0.48
MRPL28-207ENST00000461550 PRMT1Q99873 361 aaKnown RBP18.04■□□□□ 0.48
MRPL28-207ENST00000461550 BPIFA3Q9BQP9 254 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 USP36Q9P275 1121 aaKnown RBP18.04■□□□□ 0.48
MRPL28-207ENST00000461550 PILRBQ9UKJ0 227 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 SIK3Q9Y2K2 1263 aa18.04■□□□□ 0.48
MRPL28-207ENST00000461550 GOLGA8SH3BPF8 625 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 M0QYT0 321 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 CFIP05156 583 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 ATP5BP06576 529 aaKnown RBP18.03■□□□□ 0.48
MRPL28-207ENST00000461550 ABCB4P21439 1286 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 CD6P30203 668 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 CTSOP43234 321 aaPredicted RBP18.03■□□□□ 0.48
MRPL28-207ENST00000461550 IRAK1P51617 712 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 SNX16P57768 344 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 CAMK2GQ13555 558 aaPredicted RBP18.03■□□□□ 0.48
MRPL28-207ENST00000461550 E2F5Q15329 346 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 PITRM1Q5JRX3 1037 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 SPDYCQ5MJ68 293 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 FAM102AQ5T9C2 384 aaPredicted RBP18.03■□□□□ 0.48
MRPL28-207ENST00000461550 NAA35Q5VZE5 725 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 FAM124AQ86V42 546 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 ERICH1Q86X53 443 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 XYLT1Q86Y38 959 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 CCDC117Q8IWD4 279 aaPredicted RBP18.03■□□□□ 0.48
MRPL28-207ENST00000461550 ZNF397Q8NF99 534 aaPredicted RBP18.03■□□□□ 0.48
MRPL28-207ENST00000461550 OR2T3Q8NH03 318 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 PCMTD1Q96MG8 357 aaPredicted RBP18.03■□□□□ 0.48
MRPL28-207ENST00000461550 HSD3B7Q9H2F3 369 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 CBX8Q9HC52 389 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 PIGVQ9NUD9 493 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 LIMA1Q9UHB6 759 aaKnown RBP18.03■□□□□ 0.48
MRPL28-207ENST00000461550 SLC12A6Q9UHW9 1150 aa18.03■□□□□ 0.48
MRPL28-207ENST00000461550 NOCTQ9UK39 431 aaKnown RBP18.03■□□□□ 0.48
MRPL28-207ENST00000461550 SMTNL1A8MU46 457 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 LGALS16A8MUM7 142 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 SLC2A3P11169 496 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 NOS2P35228 1153 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 MATKP42679 507 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 GABRB2P47870 512 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 JAM2P57087 298 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 NOMO3P69849 1222 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 IQCB1Q15051 598 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 LRSAM1Q6UWE0 723 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 APCDD1Q8J025 514 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 ZNF557Q8N988 423 aaPredicted RBP18.02■□□□□ 0.48
MRPL28-207ENST00000461550 TTC17Q96AE7 1141 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 C18orf8Q96DM3 657 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 MYO19Q96H55 970 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 GPR174Q9BXC1 333 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 PRSS16Q9NQE7 514 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 ITM2CQ9NQX7 267 aa18.02■□□□□ 0.48
MRPL28-207ENST00000461550 NYNRINQ9P2P1 1898 aaKnown RBP18.02■□□□□ 0.47
MRPL28-207ENST00000461550 ASCC3Q8N3C0 2202 aaKnown RBP18.02■□□□□ 0.47
MRPL28-207ENST00000461550 TM4SF5O14894 197 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 ACADMP11310 421 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 ATP1A3P13637 1013 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 ZNF18P17022 549 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 CDK11BP21127 795 aaKnown RBP18.01■□□□□ 0.47
MRPL28-207ENST00000461550 MAOBP27338 520 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 SOX5P35711 763 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 MAPK8P45983 427 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 SULT1E1P49888 294 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 FBXL22Q6P050 247 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 PHLDB2Q86SQ0 1253 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 METTL3Q86U44 580 aaKnown RBP18.01■□□□□ 0.47
MRPL28-207ENST00000461550 LUZP1Q86V48 1076 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 ZDHHC17Q8IUH5 632 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 CCAR2Q8N163 923 aaKnown RBP18.01■□□□□ 0.47
MRPL28-207ENST00000461550 ANKRD20A12PQ8NF67 263 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 IGSF8Q969P0 613 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 MRGPRX3Q96LB0 322 aa18.01■□□□□ 0.47
MRPL28-207ENST00000461550 SPAG5Q96R06 1193 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms