RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PRRG1O14668 218 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 FGF18O76093 207 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 STK10O94804 968 aaKnown RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 IGLV3-25P01717 112 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 KRT14P02533 472 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 FYNP06241 537 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 CTSAP10619 480 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 TFE3P19532 575 aaPredicted RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 ITIH2P19823 946 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 STIP1P31948 543 aaKnown RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 ADRA1BP35368 520 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 CARSP49589 748 aaKnown RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 EPHB3P54753 998 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 TPI1P60174 286 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 RBM10P98175 930 aaKnown RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 UBE3AQ05086 875 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 DUSP4Q13115 394 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 KCNC3Q14003 757 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 LLGL1Q15334 1064 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 ZC3H12AQ5D1E8 599 aaKnown RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 SPDYCQ5MJ68 293 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 OTUD1Q5VV17 481 aaPredicted RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 TAS1R1Q7RTX1 841 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 ADGRD2Q7Z7M1 963 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 ITIH5Q86UX2 942 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 ZDHHC14Q8IZN3 488 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 ZNF276Q8N554 614 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 ALLCQ8N6M5 410 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 CCDC185Q8N715 623 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 SPPL3Q8TCT6 385 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 ATOH1Q92858 354 aaPredicted RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 CSPG4P5Q96PW8 444 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 HAPLN3Q96S86 360 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 KCTD15Q96SI1 283 aaPredicted RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 HERPUD2Q9BSE4 406 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 TTLL2Q9BWV7 592 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 EMILIN2Q9BXX0 1053 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 TRIM31Q9BZY9 425 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 IL21Q9HBE4 155 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 WDR6Q9NNW5 1121 aaKnown RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 GPATCH2LQ9NWQ4 482 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 DNPEPQ9ULA0 475 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 NFU1Q9UMS0 254 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 TLR6Q9Y2C9 796 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 R3HDM2Q9Y2K5 976 aaKnown RBP9.24□□□□□ -0.93
VPS50-207ENST00000458530 SHROOM3Q8TF72 1996 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 CEP250Q9BV73 2442 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 H7C0C1 242 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 PPP1R12AO14974 1030 aaPredicted RBP9.23□□□□□ -0.93
VPS50-207ENST00000458530 NCAM2O15394 837 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 FGF10O15520 208 aaPredicted RBP9.23□□□□□ -0.93
VPS50-207ENST00000458530 ABLIM3O94929 683 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 ADH1AP07327 375 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 CD48P09326 243 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 RBP3P10745 1247 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 CA8P35219 290 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 ADCY8P40145 1251 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 ATP5OP48047 213 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 KCNJ1P48048 391 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 MRPS25P82663 173 aaKnown RBP9.23□□□□□ -0.93
VPS50-207ENST00000458530 CASP8Q14790 479 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 SLMAPQ14BN4 828 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 OASLQ15646 514 aaKnown RBP9.23□□□□□ -0.93
VPS50-207ENST00000458530 CFAP58Q5T655 872 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 DARS2Q6PI48 645 aaKnown RBP9.23□□□□□ -0.93
VPS50-207ENST00000458530 ELMSAN1Q6PJG2 1045 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 CCDC149Q6ZUS6 474 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 TCEAL8Q8IYN2 117 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 MREGQ8N565 214 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 PLD5Q8N7P1 536 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 ATP6V0D2Q8N8Y2 350 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 VN1R2Q8NFZ6 395 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 TRMT2BQ96GJ1 504 aaKnown RBP9.23□□□□□ -0.93
VPS50-207ENST00000458530 CLSTN3Q9BQT9 956 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 VN1R3Q9BXE9 311 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 BRD8Q9H0E9 1235 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 TKTL2Q9H0I9 626 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 ZBP1Q9H171 429 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 OSBPL2Q9H1P3 480 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 CATSPERBQ9H7T0 1116 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 CYP4F11Q9HBI6 524 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 RXFP1Q9HBX9 757 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 ARHGEF38Q9NXL2 777 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 GMIPQ9P107 970 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 SLC27A5Q9Y2P5 690 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 YIPF1Q9Y548 306 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 ASB3Q9Y575 518 aa9.23□□□□□ -0.93
VPS50-207ENST00000458530 HELZP42694 1942 aaKnown RBP9.23□□□□□ -0.93
VPS50-207ENST00000458530 ACACBO00763 2458 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 BCLAF3A2AJT9 711 aaKnown RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 ZSCAN5CA6NGD5 496 aaPredicted RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 H0Y858 1186 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 MTSS1O43312 755 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 CREB3O43889 395 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 SEC31AO94979 1220 aaKnown RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 C1RP00736 705 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 PDGFBP01127 241 aaPredicted RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 RARGP13631 454 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 GOT1P17174 413 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 RPL17P18621 184 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms