RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 C2orf71A6NGG8 1288 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 GCKP35557 465 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 LHX1P48742 406 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 HCAR3P49019 387 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 MRPS6P82932 125 aaKnown RBP18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 TAF2Q6P1X5 1199 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 FAM35AQ86V20 835 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 TMEM86AQ8N2M4 240 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 SLC7A14Q8TBB6 771 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 FAM167BQ9BTA0 163 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 NAT9Q9BTE0 207 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 SEPT10Q9P0V9 454 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 SLC17A6Q9P2U8 582 aa18.88■□□□□ 0.61
SEMA3B-209ENST00000456560 MYBPHLA2RUH7 354 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 CCDC22O60826 627 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 AP1G2O75843 785 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 GSRP00390 522 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 AMHP03971 560 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 ERCC2P18074 760 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 CYP2B6P20813 491 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 YY1P25490 414 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 ZBTB16Q05516 673 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 WASHC2DQ5SRD0 308 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 KYAT3Q6YP21 454 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 GPRIN1Q7Z2K8 1008 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 PGAP3Q96FM1 320 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 NAF1Q96HR8 494 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 ANKRD27Q96NW4 1050 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 GORASP1Q9BQQ3 440 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 ZNF395Q9H8N7 513 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 RNPEPL1Q9HAU8 725 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 XPNPEP3Q9NQH7 507 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 CNGB3Q9NQW8 809 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 TMEM30AQ9NV96 361 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 PIH1D1Q9NWS0 290 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 SYBUQ9NX95 663 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 MIOSQ9NXC5 875 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 FBXW11Q9UKB1 542 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 RAD54BQ9Y620 910 aa18.87■□□□□ 0.61
SEMA3B-209ENST00000456560 FCHO1O14526 889 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 LIN7AO14910 233 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 PEX11AO75192 247 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 ZNF189O75820 626 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 ALDOAP04075 364 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 GM2AP17900 193 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 CACNA2D1P54289 1103 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 IFRD2Q12894 506 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 BLMHQ13867 455 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 DBN1Q16643 649 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 ZNF784Q8NCA9 323 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 CDKL2Q92772 493 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 PCED1BQ96HM7 432 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 KCNK16Q96T55 309 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 BTBD10Q9BSF8 475 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 CADM1Q9BY67 442 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 EMCNQ9ULC0 261 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 CDY2AQ9Y6F7 541 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 TMEM88BA6NKF7 163 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 HHLA1C9JL84 531 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 TOP3BO95985 862 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 SLC10A3P09131 477 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 CALB2P22676 271 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 PTPN3P26045 913 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 MLH1P40692 756 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 AFF1P51825 1210 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 CCNHP51946 323 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 PID1Q7Z2X4 250 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 ADAM32Q8TC27 787 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 GAD1Q99259 594 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 FAM105AQ9NUU6 356 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 CORO1CQ9ULV4 474 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 ST3GAL5Q9UNP4 418 aa18.86■□□□□ 0.61
SEMA3B-209ENST00000456560 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 CCDC195A0A1B0GUA6 201 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 FAM155AB1AL88 458 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 CAPN9O14815 690 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 CLGNO14967 610 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 GNAZP19086 355 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 CLCNKBP51801 687 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 PDZD4Q76G19 769 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 BHLHA9Q7RTU4 235 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 TTC7BQ86TV6 843 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 SH3TC2Q8TF17 1288 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 PGBD4Q96DM1 585 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 C20orf27Q9GZN8 174 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 TIMM13Q9Y5L4 95 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 TRPV2Q9Y5S1 764 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 PSAT1Q9Y617 370 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 PTCH2Q9Y6C5 1203 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 THP07101 528 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 ABL2P42684 1182 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 PDE1CQ14123 709 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 NAIF1Q69YI7 327 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 TRIM68Q6AZZ1 485 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 C3orf58Q8NDZ4 430 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 DENND2DQ9H6A0 471 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 CDH9Q9ULB4 789 aa18.85■□□□□ 0.61
SEMA3B-209ENST00000456560 MYADML2A6NDP7 307 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 KCNK1O00180 336 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 TPP1O14773 563 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms