RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 BTN2A1Q7KYR7 527 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 CACTIN-AS1Q8N1I8 211 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GALNT15Q8N3T1 639 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 REEP1Q9H902 201 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ZFYVE1Q9HBF4 777 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 PAK6Q9NQU5 681 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 MAN2B2Q9Y2E5 1009 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 TRAF6Q9Y4K3 522 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GTF3C1Q12789 2109 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ECE2O60344 883 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GSTT2BP0CG30 244 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 NR2F6P10588 404 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ASMTP46597 345 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 NUDT2P50583 147 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ARHGEF7Q14155 803 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SLC13A5Q86YT5 568 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 FUKQ8N0W3 1084 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF786Q8N393 782 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 MPP5Q8N3R9 675 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 LARGE2Q8N3Y3 721 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 DHRSXQ8N5I4 330 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ARL10Q8N8L6 244 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 C9orf43Q8TAL5 461 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SLC7A14Q8TBB6 771 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 AKAP1Q92667 903 aaKnown RBP eCLIP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 EDC3Q96F86 508 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SAMSN1Q9NSI8 373 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GGA3Q9NZ52 723 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ALKQ9UM73 1620 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SERPINB7O75635 380 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GATBO75879 557 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SNX4O95219 450 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ENO1P06733 434 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GPIP06744 558 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 BCAT1P54687 386 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GEMP55040 296 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 MGAT5Q09328 741 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 CDH17Q12864 832 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ABRQ12979 859 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF554Q86TJ5 538 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 NUP93Q8N1F7 819 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF655Q8N720 491 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 OR6Y1Q8NGX8 325 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 CCDC107Q8WV48 283 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ANAPC2Q9UJX6 822 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SAMD4AQ9UPU9 718 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 R3HDM2Q9Y2K5 976 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 C19orf81C9J6K1 198 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 DFNA5O60443 496 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SRGAP2O75044 1071 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 PAEPP09466 180 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF18P17022 549 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 YAP1P46937 504 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ATP6V0D1P61421 351 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 PITPNAQ00169 270 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 RINLQ6ZS11 566 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 MKL1Q969V6 931 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 MRRFQ96E11 262 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ELMO2Q96JJ3 720 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 TEKT5Q96M29 485 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 TMEM79Q9BSE2 394 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 C17orf80Q9BSJ5 609 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 AP4E1Q9UPM8 1137 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 CLIC4Q9Y696 253 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 MAGEC1O60732 1142 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 UGT2B11O75310 529 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 LRPAP1P30533 357 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GNL1P36915 607 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 POLD3Q15054 466 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 QPRTQ15274 297 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 TRAM1Q15629 374 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 NDUFA9Q16795 377 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 RSBN1Q5VWQ0 802 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 OOSP2Q86WS3 158 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SAMD14Q8IZD0 417 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 MRPL57Q9BQC6 102 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 MYOM1P52179 1685 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 DCCP43146 1447 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SNRNP35Q16560 246 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ARID3BQ8IVW6 561 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF512Q96ME7 567 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 PHB2Q99623 299 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 FAM213AQ9BRX8 229 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 RETREG1Q9H6L5 497 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 TMBIM4Q9HC24 238 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 CHORDC1Q9UHD1 332 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 AKT3Q9Y243 479 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 UBDO15205 165 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 DNAJB6O75190 326 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 LRIG2O94898 1065 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 FTCDO95954 541 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 THRBP10828 461 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TIE1P35590 1138 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SLC26A3P40879 764 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 NPY2RP49146 381 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 S100A12P80511 92 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF618Q5T7W0 954 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 AENQ8WTP8 325 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 GMCL1Q96IK5 515 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 FBXO44Q9H4M3 255 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms