RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 M0QYV0 167 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 VWA5AO00534 786 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 NOP56O00567 594 aaKnown RBP13.9□□□□□ -0.18
PCNX3-202ENST00000439247 PDGFRAP16234 1089 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 RGS7P49802 495 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 FLOT2Q14254 428 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 TMEM198Q66K66 360 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 KLHL35Q6PF15 583 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 CPNE9Q8IYJ1 553 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 RAB3IL1Q8TBN0 382 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 ARHGEF38Q9NXL2 777 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 NDUFA13Q9P0J0 144 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 RIMS3Q9UJD0 308 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 MAGED2Q9UNF1 606 aaPredicted RBP13.9□□□□□ -0.18
PCNX3-202ENST00000439247 CEPT1Q9Y6K0 416 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 RLFQ13129 1914 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 TRMUO75648 421 aaKnown RBP13.9□□□□□ -0.18
PCNX3-202ENST00000439247 DESP17661 470 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 TFE3P19532 575 aaPredicted RBP13.9□□□□□ -0.18
PCNX3-202ENST00000439247 ATXN1P54253 815 aaKnown RBP13.9□□□□□ -0.18
PCNX3-202ENST00000439247 SLFN12LQ6IEE8 588 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 KLC3Q6P597 504 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 LRRC8BQ6P9F7 803 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 TMEM192Q8IY95 271 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 C12orf42Q96LP6 360 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 KLHL32Q96NJ5 620 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 COPG2Q9UBF2 871 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 DMTF1Q9Y222 760 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 PCDHA11Q9Y5I1 949 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 PTPRFP10586 1907 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 C19orf81C9J6K1 198 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 BOLA2-SMG1P6H3BVE0 249 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 MICAL2O94851 1124 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 ERVK-10P10266 1014 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 ENO3P13929 434 aaPredicted RBP13.9□□□□□ -0.18
PCNX3-202ENST00000439247 FUT4P22083 530 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 EPHA3P29320 983 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 PPIDQ08752 370 aaKnown RBP13.9□□□□□ -0.18
PCNX3-202ENST00000439247 CAPSQ13938 189 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 CYLC2Q14093 348 aaPredicted RBP13.9□□□□□ -0.18
PCNX3-202ENST00000439247 ADGRE1Q14246 886 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 DLG2Q15700 870 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 PACS1Q6VY07 963 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 GADL1Q6ZQY3 521 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 VSIG10LQ86VR7 867 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 BRSK2Q8IWQ3 736 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 FNIP1Q8TF40 1166 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 CATSPER2Q96P56 530 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 MRPS26Q9BYN8 205 aaKnown RBP13.9□□□□□ -0.18
PCNX3-202ENST00000439247 PORCNQ9H237 461 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 DNAJC28Q9NX36 388 aa13.9□□□□□ -0.18
PCNX3-202ENST00000439247 PARP14Q460N5 1801 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 PRPSAP2O60256 369 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 FAM189A1O60320 539 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 ENDOD1O94919 500 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 CSPG5O95196 566 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 TNFAIP8O95379 198 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 LDHAP00338 332 aaKnown RBP13.89□□□□□ -0.19
PCNX3-202ENST00000439247 CHRNGP07510 517 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 CDH2P19022 906 aaPredicted RBP13.89□□□□□ -0.19
PCNX3-202ENST00000439247 PLOD1Q02809 727 aaPredicted RBP13.89□□□□□ -0.19
PCNX3-202ENST00000439247 ENPEPQ07075 957 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 FSTL1Q12841 308 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 CEACAM7Q14002 265 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 OR6B2Q6IFH4 312 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 ABHD15Q6UXT9 468 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 CATSPERGQ6ZRH7 1159 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 DSELQ8IZU8 1212 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 NLRP4Q96MN2 994 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 KCNK16Q96T55 309 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 CAB39LQ9H9S4 337 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 MOCS1Q9NZB8 636 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 TMX2-CTNND1H3BSU7 103 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 FAM58BPP0C7Q3 252 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 MLH1P40692 756 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 IRF9Q00978 393 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 SH2D4BQ5SQS7 431 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 RARS2Q5T160 578 aaKnown RBP13.89□□□□□ -0.19
PCNX3-202ENST00000439247 WDR78Q5VTH9 848 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 RCN3Q96D15 328 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 ELOVL4Q9GZR5 314 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 ZNF711Q9Y462 761 aa13.89□□□□□ -0.19
PCNX3-202ENST00000439247 APOL1O14791 398 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 SUPT3HO75486 399 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 TFPTP0C1Z6 253 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 P4HA1P13674 534 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 MAGEA3P43357 314 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 CDH15P55291 814 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 APOFQ13790 326 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 PPP2R5DQ14738 602 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 TMEM132BQ14DG7 1078 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 STILQ15468 1287 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 DUOXA2Q1HG44 320 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 FAM219BQ5XKK7 198 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 ERO1BQ86YB8 467 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 WDR49Q8IV35 697 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 SPNS2Q8IVW8 549 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 KBTBD7Q8WVZ9 684 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 ACO2Q99798 780 aaKnown RBP13.88□□□□□ -0.19
PCNX3-202ENST00000439247 ASNSD1Q9NWL6 643 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms