RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ALKBH2Q6NS38 261 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 PRUNE1Q86TP1 453 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 HORMAD1Q86X24 394 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 TOP6BLQ8N6T0 577 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 FBXO36Q8NEA4 188 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 SOWAHBA6NEL2 793 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 ZBTB14O43829 449 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 SKAP2O75563 359 aaPredicted RBP12.36□□□□□ -0.43
NEK1-201ENST00000439128 FSBPO95073 299 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 C8AP07357 584 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 TAF10Q12962 218 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 CNKSR3Q6P9H4 555 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 CHST9Q7L1S5 443 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 KIAA0895Q8NCT3 520 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 TFR2Q9UP52 801 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 TLL2Q9Y6L7 1015 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 GTPBP10A4D1E9 387 aaKnown RBP12.36□□□□□ -0.43
NEK1-201ENST00000439128 PJA2O43164 708 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 KATNA1O75449 491 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 FMO4P31512 558 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 MAPK8P45983 427 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
NEK1-201ENST00000439128 ITGA9Q13797 1035 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 CYP2A13Q16696 494 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 HTR3CQ8WXA8 447 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 FERD3LQ96RJ6 166 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 FOXP3Q9BZS1 431 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 KLHL3Q9UH77 587 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 USP27XA6NNY8 438 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 ABL2P42684 1182 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 TRPC1P48995 793 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 TTI2Q6NXR4 508 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 LAYNQ6UX15 382 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 FAM35AQ86V20 835 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
NEK1-201ENST00000439128 COL14A1Q05707 1796 aaKnown RBP12.36□□□□□ -0.43
NEK1-201ENST00000439128 KRT16P08779 473 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 GNSP15586 552 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 SKOR1P84550 965 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 SULT2A1Q06520 285 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 PRSS55Q6UWB4 352 aaPredicted RBP12.36□□□□□ -0.43
NEK1-201ENST00000439128 ABHD15Q6UXT9 468 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 TMEM161BQ8NDZ6 487 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 PACSIN1Q9BY11 444 aa12.36□□□□□ -0.43
NEK1-201ENST00000439128 DNAJC8O75937 253 aaPredicted RBP12.35□□□□□ -0.43
NEK1-201ENST00000439128 FAM107AO95990 144 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 KELP23276 732 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 FNTAP49354 379 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 DGKEP52429 567 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 INPP5AQ14642 412 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 MPPE1Q53F39 396 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 RFX8Q6ZV50 586 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 PCYOX1LQ8NBM8 494 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 PHF21AQ96BD5 680 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 SHDQ96IW2 340 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 BPIFA1Q9NP55 256 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 KRCC1Q9NPI7 259 aaPredicted RBP12.35□□□□□ -0.43
NEK1-201ENST00000439128 SAE1Q9UBE0 346 aaPredicted RBP12.35□□□□□ -0.43
NEK1-201ENST00000439128 WARS2Q9UGM6 360 aaKnown RBP12.35□□□□□ -0.43
NEK1-201ENST00000439128 TRHDEQ9UKU6 1024 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 A0A1W2PQH9 124 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 RAD51BO15315 384 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 INPP4BO15327 924 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 CDH16O75309 829 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 SH3BGRLO75368 114 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 GJB6O95452 261 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 ENO1P06733 434 aaKnown RBP12.35□□□□□ -0.43
NEK1-201ENST00000439128 ZNF618Q5T7W0 954 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 CASP10Q92851 521 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 MRPL45Q9BRJ2 306 aaKnown RBP12.35□□□□□ -0.43
NEK1-201ENST00000439128 RMND5AQ9H871 391 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 GMEB2Q9UKD1 530 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 DLG4P78352 724 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 PWP1Q13610 501 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 ALFQ53S48 1182 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 FBXO38Q6PIJ6 1188 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 FAM183BPQ6ZVS7 135 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 ANO5Q75V66 913 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 KCNK18Q7Z418 384 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 METTL3Q86U44 580 aaKnown RBP12.35□□□□□ -0.43
NEK1-201ENST00000439128 MIER2Q8N344 545 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 CEP70Q8NHQ1 597 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 HERVK_113Q902F9 699 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 TSPAN18Q96SJ8 248 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 RBM12Q9NTZ6 932 aaKnown RBP12.35□□□□□ -0.43
NEK1-201ENST00000439128 GTF2A1LQ9UNN4 478 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 ATRNO75882 1429 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 ELFN1P0C7U0 828 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 CD86P42081 329 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 PEX5P50542 639 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 FLOT2Q14254 428 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 CFAP52Q8N1V2 620 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 TSTD1Q8NFU3 115 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 OXCT2Q9BYC2 517 aaPredicted RBP12.35□□□□□ -0.43
NEK1-201ENST00000439128 ASB8Q9H765 288 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 CRYL1Q9Y2S2 319 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 ISM1B1AKI9 464 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 RAD51CO43502 376 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 DGKIO75912 1065 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 EEF1DP29692 281 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 310.7 ms