RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 LINC00303Q3SY05 128 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 MSS51Q4VC12 460 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 NCEH1Q6PIU2 408 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 FUKQ8N0W3 1084 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 MFSD2AQ8NA29 543 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 ZMIZ2Q8NF64 920 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 SERAC1Q96JX3 654 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 CCNL2Q96S94 520 aaPredicted RBP11.65□□□□□ -0.54
CSTF3-203ENST00000438862 CDK5RAP1Q96SZ6 601 aaKnown RBP11.65□□□□□ -0.54
CSTF3-203ENST00000438862 SMOQ99835 787 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.65□□□□□ -0.54
CSTF3-203ENST00000438862 SCAND2PQ9GZW5 306 aaPredicted RBP11.65□□□□□ -0.54
CSTF3-203ENST00000438862 ABCG4Q9H172 646 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 RSPH9Q9H1X1 276 aaPredicted RBP11.65□□□□□ -0.54
CSTF3-203ENST00000438862 PABPC3Q9H361 631 aaKnown RBP11.65□□□□□ -0.54
CSTF3-203ENST00000438862 CLEC4EQ9ULY5 219 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 BOD1L1Q8NFC6 3051 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 TRIM38O00635 465 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 WNT9AO14904 365 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 MDM4O15151 490 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 RNASEH1O60930 286 aaKnown RBP11.64□□□□□ -0.55
CSTF3-203ENST00000438862 GCNT3O95395 438 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 YEATS4O95619 227 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 ITGB2P05107 769 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 ATP5BP06576 529 aaKnown RBP11.64□□□□□ -0.55
CSTF3-203ENST00000438862 MYF5P13349 255 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 ITGB6P18564 788 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 NASPP49321 788 aaPredicted RBP11.64□□□□□ -0.55
CSTF3-203ENST00000438862 OVGP1Q12889 678 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 KCNJ12Q14500 433 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 IQCHQ86VS3 1027 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 ZNF366Q8N895 744 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 RASSF8Q8NHQ8 419 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 CYB5D2Q8WUJ1 264 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 NMUR1Q9HB89 426 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 KIAA1586Q9HCI6 787 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 KRT82Q9NSB4 513 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 NUDT5Q9UKK9 219 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 AGO1Q9UL18 857 aaKnown RBP11.64□□□□□ -0.55
CSTF3-203ENST00000438862 FZD4Q9ULV1 537 aa11.64□□□□□ -0.55
CSTF3-203ENST00000438862 A0A1W2PQH9 124 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 C10orf142B7Z368 130 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 LZTS3O60299 673 aaPredicted RBP11.63□□□□□ -0.55
CSTF3-203ENST00000438862 BEST1O76090 585 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 DLDP09622 509 aaKnown RBP11.63□□□□□ -0.55
CSTF3-203ENST00000438862 RALAP11233 206 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 CKMT1AP12532 417 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 TNNI1P19237 187 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 CORO1AP31146 461 aaKnown RBP11.63□□□□□ -0.55
CSTF3-203ENST00000438862 ATICP31939 592 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 HARS2P49590 506 aaKnown RBP11.63□□□□□ -0.55
CSTF3-203ENST00000438862 MAP3K7CLP57077 242 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 NFKB2Q00653 900 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 TRPC3Q13507 836 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 SLC39A14Q15043 492 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 ZSCAN23Q3MJ62 389 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 MPPE1Q53F39 396 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 CHST9Q7L1S5 443 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 KIAA0907Q7Z7F0 614 aaPredicted RBP11.63□□□□□ -0.55
CSTF3-203ENST00000438862 SPATS2Q86XZ4 545 aaKnown RBP11.63□□□□□ -0.55
CSTF3-203ENST00000438862 SLC25A45Q8N413 288 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 OR4C6Q8NH72 309 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 HPS3Q969F9 1004 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 SYAP1Q96A49 352 aaPredicted RBP11.63□□□□□ -0.55
CSTF3-203ENST00000438862 OMDQ99983 421 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 GZF1Q9H116 711 aaPredicted RBP11.63□□□□□ -0.55
CSTF3-203ENST00000438862 NEUROG2Q9H2A3 272 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 OLFML3Q9NRN5 406 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 EVA1BQ9NVM1 165 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 CLIC5Q9NZA1 410 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D7Q9P0N9 293 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 TJP2Q9UDY2 1190 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 NAGPAQ9UK23 515 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 RCOR1Q9UKL0 485 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 SATB2Q9UPW6 733 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 PCDHGA8Q9Y5G5 932 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 PCDHA5Q9Y5H7 936 aa11.63□□□□□ -0.55
CSTF3-203ENST00000438862 SPTAN1Q13813 2472 aaKnown RBP11.63□□□□□ -0.55
CSTF3-203ENST00000438862 TEP1Q99973 2627 aaKnown RBP11.62□□□□□ -0.55
CSTF3-203ENST00000438862 CDRT15L2A8MXV6 281 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 CYP26A1O43174 497 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 PPP6R2O75170 966 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 GJB6O95452 261 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 HLA-FP30511 346 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 NUDT1P36639 197 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 DUSP3P51452 185 aaPredicted RBP11.62□□□□□ -0.55
CSTF3-203ENST00000438862 ZNF445P59923 1031 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 TLE1Q04724 770 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 DNM1Q05193 864 aaKnown RBP11.62□□□□□ -0.55
CSTF3-203ENST00000438862 BMT2Q1RMZ1 405 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 ISXQ2M1V0 245 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 C3orf38Q5JPI3 329 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 NAPEPLDQ6IQ20 393 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 USP53Q70EK8 1073 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 ADIPOR2Q86V24 386 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 CBWD2Q8IUF1 395 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 DENND1CQ8IV53 801 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 FAM217AQ8IXS0 508 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 AHI1Q8N157 1196 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 ARL14Q8N4G2 192 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms