RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 C2CD2LO14523 706 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 STRNO43815 780 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 PTP4A3O75365 173 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 FGFR1OPO95684 399 aaKnown RBP6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 AMY2AP04746 511 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 AMY2BP19961 511 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 TMOD1P28289 359 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 ARFIP1P53367 373 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 ZP2Q05996 745 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 ACTN3Q08043 901 aaPredicted RBP6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 ITGB3BPQ13352 177 aaPredicted RBP6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 GRB14Q14449 540 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 TDRD12Q587J7 1177 aaKnown RBP6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 PITRM1Q5JRX3 1037 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 CACNA2D4Q7Z3S7 1137 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 IL22RA1Q8N6P7 574 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 CREB3L4Q8TEY5 395 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 TRAPPC12Q8WVT3 735 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 CASKIN2Q8WXE0 1202 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 KAT5Q92993 513 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 NKD2Q969F2 451 aaPredicted RBP6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 HIC2Q96JB3 615 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 JPH2Q9BR39 696 aaPredicted RBP6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 AP5M1Q9H0R1 490 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 DCP1AQ9NPI6 582 aaPredicted RBP6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 SEPT11Q9NVA2 429 aaKnown RBP6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 ZNF624Q9P2J8 865 aaPredicted RBP6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 DNAJB9Q9UBS3 223 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 PIAS3Q9Y6X2 628 aa6.44□□□□□ -1.38
NIPAL3-205ENST00000432012 GOLGA6L10A6NI86 522 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 E7EVH7 732 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 APOL1O14791 398 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CAPN9O14815 690 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 TM4SF5O14894 197 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 MTSS1O43312 755 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 PALMO75781 387 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 NDST3O95803 873 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 MLYCDO95822 493 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 MYF5P13349 255 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CIITAP33076 1130 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 RAB1AP62820 205 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 TUSC3Q13454 348 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 DRP2Q13474 957 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 IL10RAQ13651 578 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 TBCCQ15814 346 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 RBM20Q5T481 1227 aaKnown RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 WDR73Q6P4I2 378 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 HEATR3Q7Z4Q2 680 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CCDC13Q8IYE1 715 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 OXR1Q8N573 874 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 ZNF610Q8N9Z0 462 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 GALNT11Q8NCW6 608 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 SH3RF3Q8TEJ3 882 aaPredicted RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CUL5Q93034 780 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 GTPBP3Q969Y2 492 aaKnown RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 ZNF764Q96H86 408 aaPredicted RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 KRT12Q99456 494 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 TACO1Q9BSH4 297 aaKnown RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 EDEM3Q9BZQ6 932 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CDIP1Q9H305 208 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 GPR27Q9NS67 375 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 BARHL2Q9NY43 387 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 ARPP21Q9UBL0 812 aaPredicted RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CPNE7Q9UBL6 633 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CHUKO15111 745 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 TMPRSS2O15393 492 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 ST8SIA5O15466 376 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CCNT1O60563 726 aaKnown RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 FTCDO95954 541 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 KITP10721 976 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 ACTN1P12814 892 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CSF2RAP15509 400 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 HSPA9P38646 679 aaKnown RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 GNAQP50148 359 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 DNA2P51530 1060 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 LRRC63Q05C16 580 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 COASYQ13057 564 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 GRM4Q14833 912 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 LASP1Q14847 261 aaKnown RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 LETM2Q2VYF4 491 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CCDC40Q4G0X9 1142 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CAVIN4Q5BKX8 364 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CEP85LQ5SZL2 805 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 C6orf89Q6UWU4 347 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 ASCL5Q7RTU5 278 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 GALNT15Q8N3T1 639 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 ARFGAP2Q8N6H7 521 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 ANKRD49Q8WVL7 239 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 GIMAP1Q8WWP7 306 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 ST8SIA4Q92187 359 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 NSUN4Q96CB9 384 aaKnown RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 TMEM41AQ96HV5 264 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 INPP4AQ96PE3 977 aaPredicted RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 LSM14BQ9BX40 385 aaKnown RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 CRNKL1Q9BZJ0 848 aaKnown RBP6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 TMBIM4Q9HC24 238 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 XPNPEP3Q9NQH7 507 aa6.43□□□□□ -1.38
NIPAL3-205ENST00000432012 KLC4Q9NSK0 619 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms