RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 EIF3EP60228 445 aaKnown RBP18.8■□□□□ 0.6
HMGN1-206ENST00000431390 MRPS25P82663 173 aaKnown RBP18.8■□□□□ 0.6
HMGN1-206ENST00000431390 HYAL1Q12794 435 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 MS4A13Q5J8X5 152 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 C1orf228Q6PIY5 440 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 NPNTQ6UXI9 565 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 TBC1D31Q96DN5 1066 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 CCDC114Q96M63 670 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 ATXN3LQ9H3M9 355 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 ETNK2Q9NVF9 386 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 DNMT3BQ9UBC3 853 aaKnown RBP18.8■□□□□ 0.6
HMGN1-206ENST00000431390 NEU3Q9UQ49 428 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 ZNF148Q9UQR1 794 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 UTP11Q9Y3A2 253 aaKnown RBP18.8■□□□□ 0.6
HMGN1-206ENST00000431390 RAD54BQ9Y620 910 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 SOBPA7XYQ1 873 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 RHOP08100 348 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 MBL2P11226 248 aaPredicted RBP18.79■□□□□ 0.6
HMGN1-206ENST00000431390 HDCP19113 662 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 CYP4F8P98187 520 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 XRCC4Q13426 336 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 KCNC3Q14003 757 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 CTC1Q2NKJ3 1217 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 TXNDC8Q6A555 127 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 TMCO3Q6UWJ1 677 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 PDZD4Q76G19 769 aaPredicted RBP18.79■□□□□ 0.6
HMGN1-206ENST00000431390 IFT20Q8IY31 132 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 SEC14L1Q92503 715 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 CATSPERBQ9H7T0 1116 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 TRPC7Q9HCX4 862 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 GDF3Q9NR23 364 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 HCFC1R1Q9NWW0 138 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 PPARGC1AQ9UBK2 798 aaKnown RBP18.79■□□□□ 0.6
HMGN1-206ENST00000431390 HEY1Q9Y5J3 304 aa18.79■□□□□ 0.6
HMGN1-206ENST00000431390 NOTCH4Q99466 2003 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 DOCK4Q8N1I0 1966 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 HELZP42694 1942 aaKnown RBP18.78■□□□□ 0.6
HMGN1-206ENST00000431390 TRAV19A0A0A6YYK7 116 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 A0A1W2PRU2 124 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 SPDYE4A6NLX3 237 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 E9PAM4 449 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 MBTPS2O43462 519 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 STC2O76061 302 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 SRGAP2BP0DMP2 458 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 RBP3P10745 1247 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 TNFRSF8P28908 595 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 SERPINB6P35237 376 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 GGCXP38435 758 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 SLC11A2P49281 568 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 SLC7A9P82251 487 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 GUCY2DQ02846 1103 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 GBE1Q04446 702 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 ARTNQ5T4W7 220 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 LRRC31Q6UY01 552 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 ZNF683Q8IZ20 524 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 ALLCQ8N6M5 410 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 ARL14EPQ8N8R7 260 aaPredicted RBP18.78■□□□□ 0.6
HMGN1-206ENST00000431390 ZFRQ96KR1 1074 aaKnown RBP18.78■□□□□ 0.6
HMGN1-206ENST00000431390 PRMT1Q99873 361 aaKnown RBP18.78■□□□□ 0.6
HMGN1-206ENST00000431390 ERP44Q9BS26 406 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 DZANK1Q9NVP4 752 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 DTLQ9NZJ0 730 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 WDFY4Q6ZS81 3184 aa18.78■□□□□ 0.6
HMGN1-206ENST00000431390 IGLV3-10A0A075B6K4 115 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 CCDC195A0A1B0GUA6 201 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 ACSL4O60488 711 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 TBX10O75333 385 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 LATS1O95835 1130 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 VSNL1P62760 191 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 AUHQ13825 339 aaKnown RBP18.77■□□□□ 0.6
HMGN1-206ENST00000431390 PTK6Q13882 451 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 PPP1R7Q15435 360 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 SMAD2Q15796 467 aaKnown RBP18.77■□□□□ 0.6
HMGN1-206ENST00000431390 RWDD4Q6NW29 188 aaKnown RBP18.77■□□□□ 0.6
HMGN1-206ENST00000431390 SHKBP1Q8TBC3 707 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 ZNF707Q96C28 371 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-206ENST00000431390 OLFM3Q96PB7 478 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 SLC22A12Q96S37 553 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 TRIM51Q9BSJ1 452 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 IGFLR1Q9H665 355 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 SFXN1Q9H9B4 322 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 EPB41L5Q9HCM4 733 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 MUTYHQ9UIF7 546 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 ZMYM5Q9UJ78 669 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 NEU2Q9Y3R4 380 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 DOCK6Q96HP0 2047 aa18.77■□□□□ 0.6
HMGN1-206ENST00000431390 CFAP69A5D8W1 941 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 WASH4PA8MWX3 477 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 HACD1B0YJ81 288 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 LINC01565O15544 149 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 MFSD11O43934 449 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 CORO1AP31146 461 aaKnown RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 CCR2P41597 374 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 DRG2P55039 364 aaKnown RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 SLC10A2Q12908 348 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 ARHGAP15Q53QZ3 475 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 RAP1GAP2Q684P5 730 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 DUPD1Q68J44 220 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 GSTA5Q7RTV2 222 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 C14orf80Q86SX3 495 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms