RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 PAPSS1O43252 624 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 LDOC1O95751 146 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 OAS1P00973 400 aaKnown RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 ITGB3P05106 788 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 PNMA6AP0CW24 399 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 MYF5P13349 255 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 PFKLP17858 780 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 PAX3P23760 479 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 PDE6CP51160 858 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 UCNP55089 124 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 PCBP4P57723 403 aaKnown RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 MYL6P60660 151 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 CDK17Q00537 523 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 VAC14Q08AM6 782 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 RAPGEF1Q13905 1077 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 ANO4Q32M45 955 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 INTS6LQ5JSJ4 861 aaKnown RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 PRAMEF14Q5SWL7 426 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 BROXQ5VW32 411 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 BTBD8Q5XKL5 378 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 SPOPLQ6IQ16 392 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 RRAGAQ7L523 313 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 PDCL2Q8N4E4 241 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 EXD3Q8N9H8 876 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 SHC3Q92529 594 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 SNX19Q92543 992 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 WBP2Q969T9 261 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 ELMO3Q96BJ8 720 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 CNDP2Q96KP4 475 aaKnown RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 BAG1Q99933 345 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 STK33Q9BYT3 514 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 FAM117AQ9C073 453 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 NUCKS1Q9H1E3 243 aaKnown RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 C6orf106Q9H6K1 298 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 TM9SF3Q9HD45 589 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 DDX43Q9NXZ2 648 aaKnown RBP10.54□□□□□ -0.72
ATG4B-212ENST00000430617 AIPL1Q9NZN9 384 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 TRPM5Q9NZQ8 1165 aa10.54□□□□□ -0.72
ATG4B-212ENST00000430617 SOWAHDA6NJG2 315 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 PHACTR2O75167 634 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 ABL1P00519 1130 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 CST3P01034 146 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-212ENST00000430617 C1SP09871 688 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 SKILP12757 684 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 ACO1P21399 889 aaKnown RBP10.53□□□□□ -0.72
ATG4B-212ENST00000430617 GLDCP23378 1020 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 POLR2BP30876 1174 aaKnown RBP10.53□□□□□ -0.72
ATG4B-212ENST00000430617 PRKCIP41743 596 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 CTSKP43235 329 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 ASPAP45381 313 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 CUL2Q13617 745 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 DRAP1Q14919 205 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-212ENST00000430617 ZNF699Q32M78 642 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 CFAP221Q4G0U5 840 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 C6orf132Q5T0Z8 1188 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 SMYD5Q6GMV2 418 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 GRAMD4Q6IC98 578 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 RAD9BQ6WBX8 426 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 ZNF574Q6ZN55 896 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-212ENST00000430617 ENOSF1Q7L5Y1 443 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 OSTM1Q86WC4 334 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 CACUL1Q86Y37 369 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 BBS7Q8IWZ6 715 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 PPM1KQ8N3J5 372 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 ZNF397Q8NF99 534 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-212ENST00000430617 TAF4BQ92750 862 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 TATDN2Q93075 761 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 FAXDC2Q96IV6 333 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 FAM81BQ96LP2 452 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 SPAG5Q96R06 1193 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 ACBD6Q9BR61 282 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 SYT11Q9BT88 431 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 NIF3L1Q9GZT8 377 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.53□□□□□ -0.722e-6■■■■■ 96.1
ATG4B-212ENST00000430617 SPHK2Q9NRA0 654 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 DNAJC17Q9NVM6 304 aaKnown RBP10.53□□□□□ -0.72
ATG4B-212ENST00000430617 DPP3Q9NY33 737 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 ARHGAP20Q9P2F6 1191 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 TBC1D14Q9P2M4 693 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 L1RE1Q9UN81 338 aa10.53□□□□□ -0.72
ATG4B-212ENST00000430617 HEMK1Q9Y5R4 338 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-212ENST00000430617 ZFC3H1O60293 1989 aaKnown RBP10.52□□□□□ -0.72
ATG4B-212ENST00000430617 KLK10O43240 276 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 ATP2C2O75185 946 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 IGLV3-19P01714 112 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 PLEKP08567 350 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-212ENST00000430617 MBL2P11226 248 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-212ENST00000430617 TBXAS1P24557 533 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-212ENST00000430617 ATICP31939 592 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 SOX5P35711 763 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 STAT1P42224 750 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 GRIA4P48058 902 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 MAPK8IP2Q13387 824 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-212ENST00000430617 TRPC3Q13507 836 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 UBAP2LQ14157 1087 aaKnown RBP10.52□□□□□ -0.73
ATG4B-212ENST00000430617 SHBQ15464 509 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 ASIC2Q16515 512 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 SGSM1Q2NKQ1 1148 aa10.52□□□□□ -0.73
ATG4B-212ENST00000430617 C4orf17Q53FE4 359 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms