RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 LAMP2P13473 410 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 IL9P15248 144 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 Q6ZNB5 142 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 KLHL7Q8IXQ5 586 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 ZNF683Q8IZ20 524 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 ZNF276Q8N554 614 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 TAB3Q8N5C8 712 aaPredicted RBP13.86□□□□□ -0.19
PRPF39-202ENST00000424478 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.86□□□□□ -0.19
PRPF39-202ENST00000424478 RBM41Q96IZ5 413 aaKnown RBP13.86□□□□□ -0.19
PRPF39-202ENST00000424478 HAPLN3Q96S86 360 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 MAK16Q9BXY0 300 aaKnown RBP13.86□□□□□ -0.19
PRPF39-202ENST00000424478 RBM12Q9NTZ6 932 aaKnown RBP13.86□□□□□ -0.19
PRPF39-202ENST00000424478 SLC12A6Q9UHW9 1150 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 F5P12259 2224 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 MBTPS2O43462 519 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 FGF19O95750 216 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 SLC2A3P11169 496 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 ADGRF1Q5T601 910 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 NCBP2-AS2Q69YL0 99 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 VITQ6UXI7 678 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 ARHGAP36Q6ZRI8 547 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRPF39-202ENST00000424478 EPAS1Q99814 870 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 DDX47Q9H0S4 455 aaKnown RBP13.85□□□□□ -0.19
PRPF39-202ENST00000424478 ACTL7AQ9Y615 435 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 KIF26AQ9ULI4 1882 aaPredicted RBP13.85□□□□□ -0.19
PRPF39-202ENST00000424478 ANTXRLA6NF34 631 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 C2CD4DB7Z1M9 353 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 F5H5T6 163 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 TBL1XO60907 577 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 NNTQ13423 1086 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 DPYSQ14117 519 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 FSCBQ5H9T9 825 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 MAFAQ8NHW3 353 aaPredicted RBP13.85□□□□□ -0.19
PRPF39-202ENST00000424478 DDI1Q8WTU0 396 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 CEP41Q9BYV8 373 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 EPC1Q9H2F5 836 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 GTSE1Q9NYZ3 720 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 LCMT1Q9UIC8 334 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 LSM7Q9UK45 103 aaKnown RBP13.85□□□□□ -0.19
PRPF39-202ENST00000424478 USP34Q70CQ2 3546 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 F5H423 210 aaPredicted RBP13.85□□□□□ -0.19
PRPF39-202ENST00000424478 PGRMC1O00264 195 aaKnown RBP13.85□□□□□ -0.19
PRPF39-202ENST00000424478 KRIT1O00522 736 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 POU2F2P09086 479 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 MESP2Q0VG99 397 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 SIX1Q15475 284 aaPredicted RBP13.85□□□□□ -0.19
PRPF39-202ENST00000424478 ANO4Q32M45 955 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 MANEALQ5VSG8 457 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 TDRD5Q8NAT2 981 aaKnown RBP13.85□□□□□ -0.19
PRPF39-202ENST00000424478 SUSD6Q92537 303 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 PBKQ96KB5 322 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 NUMBLQ9Y6R0 609 aa13.85□□□□□ -0.19
PRPF39-202ENST00000424478 TCF20Q9UGU0 1960 aaKnown RBP13.85□□□□□ -0.19
PRPF39-202ENST00000424478 DENND4AQ7Z401 1863 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 NEDD8-MDP1E9PL57 170 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 H3BRJ5 948 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 KPNA1P52294 538 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-202ENST00000424478 OTUD4Q01804 1114 aaKnown RBP13.84□□□□□ -0.19
PRPF39-202ENST00000424478 KLF1Q13351 362 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-202ENST00000424478 LY6G5CQ5SRR4 150 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 MAP7D3Q8IWC1 876 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 CARNMT1Q8N4J0 409 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 NOA1Q8NC60 698 aaKnown RBP13.84□□□□□ -0.19
PRPF39-202ENST00000424478 ACTL9Q8TC94 416 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 OSBPL2Q9H1P3 480 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 LIMD1Q9UGP4 676 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 NUP210Q8TEM1 1887 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-202ENST00000424478 A0A0D9SEW6 157 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
PRPF39-202ENST00000424478 PAPLNO95428 1278 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 DDX6P26196 483 aaKnown RBP eCLIP13.84□□□□□ -0.19
PRPF39-202ENST00000424478 MTHFRP42898 656 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 PDK2Q15119 407 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 HTR3DQ70Z44 454 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 RASGEF1CQ8N431 466 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 CELF5Q8N6W0 485 aaKnown RBP13.84□□□□□ -0.19
PRPF39-202ENST00000424478 PRELID2Q8N945 189 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 TBC1D31Q96DN5 1066 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 ZNF670Q9BS34 389 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 COL4A3Q01955 1670 aa13.84□□□□□ -0.19
PRPF39-202ENST00000424478 DFFAO00273 331 aa13.83□□□□□ -0.19
PRPF39-202ENST00000424478 NAA30Q147X3 362 aaPredicted RBP13.83□□□□□ -0.19
PRPF39-202ENST00000424478 TTC27Q6P3X3 843 aa13.83□□□□□ -0.19
PRPF39-202ENST00000424478 LGMNQ99538 433 aa13.83□□□□□ -0.19
PRPF39-202ENST00000424478 KLC2Q9H0B6 622 aa13.83□□□□□ -0.19
PRPF39-202ENST00000424478 ZFP14Q9HCL3 533 aa13.83□□□□□ -0.19
PRPF39-202ENST00000424478 DNPEPQ9ULA0 475 aa13.83□□□□□ -0.19
PRPF39-202ENST00000424478 APOL1O14791 398 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 GLDCP23378 1020 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 USP4Q13107 963 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 IER5LQ5T953 404 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 PTCRAQ6ISU1 281 aaPredicted RBP13.83□□□□□ -0.2
PRPF39-202ENST00000424478 LRRC31Q6UY01 552 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 ZNF354CQ86Y25 554 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 FAM71BQ8TC56 605 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 BPIFB1Q8TDL5 484 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 ERLEC1Q96DZ1 483 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 DUS2Q9NX74 493 aaKnown RBP13.83□□□□□ -0.2
PRPF39-202ENST00000424478 DCLK1O15075 740 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms