RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 RASAL2Q9UJF2 1139 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 NUDT5Q9UKK9 219 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 FZD4Q9ULV1 537 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 CA5BQ9Y2D0 317 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 ITPR2Q14571 2701 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 NPHP3-ACAD11A0A0J9YXS1 232 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 A8MXQ7 604 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 PRAMEF26H0Y7S4 382 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 WNT7AO00755 349 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 SCAMP1O15126 338 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 PIAS2O75928 621 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 PRPF6O94906 941 aaKnown RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 IL1BP01584 269 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 TNNC2P02585 160 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 PTPN1P18031 435 aaKnown RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 WT1P19544 449 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 GUCY2CP25092 1073 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 CORO1AP31146 461 aaKnown RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 SLC6A4P31645 630 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 ADPRHP54922 357 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 HNRNPKP61978 463 aaKnown RBP eCLIP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 PPP2CBP62714 309 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 TNNC1P63316 161 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 PPP2CAP67775 309 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 LSM11P83369 360 aaKnown RBP eCLIP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 AAMPQ13685 434 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 DRAP1Q14919 205 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 ZXDCQ2QGD7 858 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 DEFB133Q30KQ1 61 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 PPP1R15BQ5SWA1 713 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 PPP1R26Q5T8A7 1209 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 TMEM215Q68D42 235 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 C1orf186Q6ZWK4 172 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 DPH6Q7L8W6 267 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 DENND1CQ8IV53 801 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 DIS3L2Q8IYB7 885 aaKnown RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 AHI1Q8N157 1196 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 C1orf127Q8N9H9 656 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 CPT1CQ8TCG5 803 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 ABHD17AQ96GS6 310 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 ANKRD36BP1Q96IX9 119 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 PPP1R13BQ96KQ4 1090 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 CATSPER2Q96P56 530 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 GFM1Q96RP9 751 aaKnown RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 KCNK16Q96T55 309 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 CCDC3Q9BQI4 270 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 SLC2A11Q9BYW1 496 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 DCLK3Q9C098 648 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 RSPH9Q9H1X1 276 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 TMEM245Q9H330 911 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 FBXO44Q9H4M3 255 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 PREBQ9HCU5 417 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 DMAP1Q9NPF5 467 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 ABCB8Q9NUT2 735 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 RBAKQ9NYW8 714 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-203ENST00000424270 GGA2Q9UJY4 613 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 NAGPAQ9UK23 515 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 FBXO10Q9UK96 956 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 DMTF1Q9Y222 760 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 LOXL2Q9Y4K0 774 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 KNL1Q8NG31 2342 aa6.6□□□□□ -1.35
SDCBP-203ENST00000424270 TLN1Q9Y490 2541 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 LRBAP50851 2863 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 FBN3Q75N90 2809 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 LRRK1Q38SD2 2015 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 POLQO75417 2590 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 WIPF3A6NGB9 483 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 ZNF891A8MT65 544 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 ANKRD63C9JTQ0 380 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 NVLO15381 856 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 SLC31A1O15431 190 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 HNRNPRO43390 633 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 GREM1O60565 184 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 SIN3BO75182 1162 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 TBCAO75347 108 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 AP1G2O75843 785 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 ADH1BP00325 375 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 DLDP09622 509 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 GOT1P17174 413 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 ITIH1P19827 911 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 SCP2P22307 547 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 WARSP23381 471 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 NUDT1P36639 197 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 COPB1P53618 953 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 NCKAP1LP55160 1127 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 DHX8Q14562 1220 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 EIF2S3LQ2VIR3 472 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 MPPE1Q53F39 396 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 PERM1Q5SV97 790 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 SNX30Q5VWJ9 437 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 RNF219Q5W0B1 726 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 NUGGCQ68CJ6 796 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 MBLAC2Q68D91 279 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 RSRC2Q7L4I2 434 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 PTAR1Q7Z6K3 402 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 CCDC117Q8IWD4 279 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 TP53INP2Q8IXH6 220 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 SLC34A3Q8N130 599 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 LMX1AQ8TE12 382 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 KBTBD7Q8WVZ9 684 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms