RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 EMP3P54852 163 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 MS4A2Q01362 244 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 DSELQ8IZU8 1212 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 ABTB1Q969K4 478 aaPredicted RBP21.8■■□□□ 1.08
USP48-205ENST00000421625 ATXN7L3BQ96GX2 97 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 CATSPER2Q96P56 530 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 NIFKQ9BYG3 293 aaKnown RBP21.8■■□□□ 1.08
USP48-205ENST00000421625 WDR55Q9H6Y2 383 aaPredicted RBP21.8■■□□□ 1.08
USP48-205ENST00000421625 PIM2Q9P1W9 311 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 CIDEBQ9UHD4 219 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 CILPO75339 1184 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 EGFRP00533 1210 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 FAM58BPP0C7Q3 252 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 CXCL8P10145 99 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 FSTL1Q12841 308 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 PDK1Q15118 436 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 ZNF423Q2M1K9 1284 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 BOLA3Q53S33 107 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 HSP90AA5PQ58FG0 334 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 KCNT2Q6UVM3 1135 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 ZNF410Q86VK4 478 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 CDKL2Q92772 493 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 GCOM2Q9BZD3 368 aaPredicted RBP21.8■■□□□ 1.08
USP48-205ENST00000421625 NEMP1O14524 444 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 CFLARO15519 480 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 AMHP03971 560 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 CCDC166P0CW27 439 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 ADARP55265 1226 aaKnown RBP21.79■■□□□ 1.08
USP48-205ENST00000421625 SEMA5AQ13591 1074 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 CYLC2Q14093 348 aaPredicted RBP21.79■■□□□ 1.08
USP48-205ENST00000421625 MAP1SQ66K74 1059 aaPredicted RBP21.79■■□□□ 1.08
USP48-205ENST00000421625 CYS1Q717R9 158 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 RBM12BQ8IXT5 1001 aaKnown RBP21.79■■□□□ 1.08
USP48-205ENST00000421625 C1orf127Q8N9H9 656 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 BHLHE22Q8NFJ8 381 aaPredicted RBP21.79■■□□□ 1.08
USP48-205ENST00000421625 ADAM32Q8TC27 787 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 KBTBD7Q8WVZ9 684 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 MFHAS1Q9Y4C4 1052 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 CDY2AQ9Y6F7 541 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 CDY1Q9Y6F8 540 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 NFICP08651 508 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 ERVK-10P10266 1014 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 TFE3P19532 575 aaPredicted RBP21.79■■□□□ 1.08
USP48-205ENST00000421625 MX2P20592 715 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 GLDCP23378 1020 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 SURF1Q15526 300 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 PCYT2Q99447 389 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 TCF7L2Q9NQB0 619 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 MAGEB3O15480 346 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 BNC2Q6ZN30 1099 aaPredicted RBP21.79■■□□□ 1.08
USP48-205ENST00000421625 RNF149Q8NC42 400 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 NETO2Q8NC67 525 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 ARNTL2Q8WYA1 636 aa21.79■■□□□ 1.08
USP48-205ENST00000421625 PRPF19Q9UMS4 504 aaKnown RBP21.79■■□□□ 1.08
USP48-205ENST00000421625 HEMK1Q9Y5R4 338 aaPredicted RBP21.79■■□□□ 1.08
USP48-205ENST00000421625 B4GALT5O43286 388 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 TMED1Q13445 227 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 CEACAM7Q14002 265 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 TARBP2Q15633 366 aaKnown RBP21.78■■□□□ 1.08
USP48-205ENST00000421625 PIGGQ5H8A4 983 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 TSHZ1Q6ZSZ6 1077 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 TDRD5Q8NAT2 981 aaKnown RBP21.78■■□□□ 1.08
USP48-205ENST00000421625 KYQ8NBH2 561 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 SERPINI1Q99574 410 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 TIMMDC1Q9NPL8 285 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 SNX15Q9NRS6 342 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 CEPT1Q9Y6K0 416 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 RPS6KL1Q9Y6S9 549 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 PTPRFP10586 1907 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 ARHGAP10A1A4S6 786 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 STX16-NPEPL1H3BU86 382 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 B4GALT4O60513 344 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 TRMUO75648 421 aaKnown RBP21.78■■□□□ 1.08
USP48-205ENST00000421625 ITGB3P05106 788 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 INSCQ1MX18 579 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 EEF1DP3Q658K8 133 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 DUS1LQ6P1R4 473 aaKnown RBP21.78■■□□□ 1.08
USP48-205ENST00000421625 FAM83AQ86UY5 434 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 ADCY4Q8NFM4 1077 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 RCN3Q96D15 328 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 ZNF670Q9BS34 389 aa21.78■■□□□ 1.08
USP48-205ENST00000421625 FER1L6Q2WGJ9 1857 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 COL11A1P12107 1806 aaPredicted RBP21.77■■□□□ 1.08
USP48-205ENST00000421625 THRAP10827 490 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 MLH1P40692 756 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 DPP6P42658 865 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 EFNA5P52803 228 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 ATXN1P54253 815 aaKnown RBP21.77■■□□□ 1.08
USP48-205ENST00000421625 USP41Q3LFD5 358 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 C4orf22Q6V702 233 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 LRRC71Q8N4P6 559 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 PLEKHG4BQ96PX9 1271 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 ANK1P16157 1881 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 CDH2P19022 906 aaPredicted RBP21.77■■□□□ 1.08
USP48-205ENST00000421625 C16orf89Q6UX73 402 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 KLHL32Q96NJ5 620 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 CEP41Q9BYV8 373 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 PICK1Q9NRD5 415 aa21.77■■□□□ 1.08
USP48-205ENST00000421625 ENO3P13929 434 aaPredicted RBP21.76■■□□□ 1.07
USP48-205ENST00000421625 DESP17661 470 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms