RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 GRIK1P39086 918 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 ABCG1P45844 678 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 KRR1Q13601 381 aaKnown RBP11.29□□□□□ -0.6
HPS4-202ENST00000398145 CCDC85BQ15834 202 aaPredicted RBP11.29□□□□□ -0.6
HPS4-202ENST00000398145 DCAF4L1Q3SXM0 396 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 ATP6AP1LQ52LC2 224 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 PPP1R15BQ5SWA1 713 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 HORMAD1Q86X24 394 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 TAGAPQ8N103 731 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 URGCPQ8TCY9 931 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
HPS4-202ENST00000398145 DHX33Q9H6R0 707 aaKnown RBP11.29□□□□□ -0.6
HPS4-202ENST00000398145 LNPEPQ9UIQ6 1025 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 ITGB1BP2Q9UKP3 347 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 GOLGA8TH3BQL2 631 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 SLURP2P0DP57 97 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 CYP2C9P11712 490 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 CHRNB2P17787 502 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 CHRM3P20309 590 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 RAP1GDS1P52306 607 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 PSME3P61289 254 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 ANO7Q6IWH7 933 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 UNC5AQ6ZN44 842 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 HPS6Q86YV9 775 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 ADCY4Q8NFM4 1077 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 RCN3Q96D15 328 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 SLC10A4Q96EP9 437 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 ACE2Q9BYF1 805 aaPredicted RBP11.29□□□□□ -0.6
HPS4-202ENST00000398145 PNPOQ9NVS9 261 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 TRHDEQ9UKU6 1024 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 UBIAD1Q9Y5Z9 338 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 MYH8P13535 1937 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 MRC1P22897 1456 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 TRIM38O00635 465 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 MAP3K13O43283 966 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 LYPLA2O95372 231 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 LRPAP1P30533 357 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 CRHR1P34998 444 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 BACE1P56817 501 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 MON1BQ7L1V2 547 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 SPATA2LQ8IUW3 424 aaPredicted RBP11.29□□□□□ -0.6
HPS4-202ENST00000398145 NAT14Q8WUY8 206 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 FICDQ9BVA6 458 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 OSBPL11Q9BXB4 747 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 ZNF556Q9HAH1 456 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 PNPLA3Q9NST1 481 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 ADAM28Q9UKQ2 775 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 RNF112Q9ULX5 631 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 RAP2CQ9Y3L5 183 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 FAM32AQ9Y421 112 aaKnown RBP11.29□□□□□ -0.6
HPS4-202ENST00000398145 PKP3Q9Y446 797 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 PCDHA2Q9Y5H9 948 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 CFAP99D6REC4 459 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 ASS1P00966 412 aaKnown RBP11.29□□□□□ -0.6
HPS4-202ENST00000398145 EPHA3P29320 983 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 CDKN2BP42772 138 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 RGS4P49798 205 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 YWHAZP63104 245 aaKnown RBP11.29□□□□□ -0.6
HPS4-202ENST00000398145 STK32CQ86UX6 486 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 C10orf107Q8IVU9 208 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 TNS4Q8IZW8 715 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 NKX1-2Q9UD57 310 aaPredicted RBP11.29□□□□□ -0.6
HPS4-202ENST00000398145 ADCY6O43306 1168 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 LGR5O75473 907 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 CCDC130P13994 396 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 DNAJB2P25686 324 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 SLC26A2P50443 739 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 USP4Q13107 963 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 MSLNQ13421 630 aaPredicted RBP11.28□□□□□ -0.6
HPS4-202ENST00000398145 GALNTL6Q49A17 601 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 FAM98BQ52LJ0 330 aaKnown RBP11.28□□□□□ -0.6
HPS4-202ENST00000398145 SCARA3Q6AZY7 606 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 ZNF470Q6ECI4 717 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 STYK1Q6J9G0 422 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 MICALL2Q8IY33 904 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 EFHBQ8N7U6 833 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 ASIC4Q96FT7 647 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 SNRNP25Q9BV90 132 aaKnown RBP11.28□□□□□ -0.6
HPS4-202ENST00000398145 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 LRRC42Q9Y546 428 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 SNCAIPQ9Y6H5 919 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 ERI2A8K979 691 aaKnown RBP11.28□□□□□ -0.6
HPS4-202ENST00000398145 NKRFO15226 690 aaKnown RBP eCLIP11.28□□□□□ -0.6
HPS4-202ENST00000398145 CBFA2T3O75081 653 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 DSG3P32926 999 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 GRIA3P42263 894 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 PLK1P53350 603 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 SLC18A1P54219 525 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 KLF10Q13118 480 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 BFSP2Q13515 415 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 SGO1Q5FBB7 561 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 FNBP1LQ5T0N5 605 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 DRICH1Q6PGQ1 229 aaPredicted RBP11.28□□□□□ -0.6
HPS4-202ENST00000398145 METTL7BQ6UX53 244 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 BANPQ8N9N5 519 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 AGBL3Q8NEM8 1001 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 BLOC1S5Q8TDH9 187 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 FNIP1Q8TF40 1166 aa11.28□□□□□ -0.6
HPS4-202ENST00000398145 ZNF384Q8TF68 577 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms