RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 FGGP02679 453 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 CTAGE8P0CG41 777 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 RARGP13631 454 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 PGFP49763 221 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 PITX1P78337 314 aaPredicted RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 FCHO2Q0JRZ9 810 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 ATP13A4Q4VNC1 1196 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 RAB6CQ53S08 254 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 TXNRD3NBQ6F5E7 133 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 C1orf228Q6PIY5 440 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 DNAJB7Q7Z6W7 309 aaPredicted RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 TADA2BQ86TJ2 420 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 CTAGE6Q86UF2 777 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 LONP2Q86WA8 852 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 FAM131BQ86XD5 332 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 TMC8Q8IU68 726 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 CTAGE4Q8IX94 777 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 RASGEF1CQ8N431 466 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 CSGALNACT1Q8TDX6 532 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 DQX1Q8TE96 717 aaKnown RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 RNF34Q969K3 372 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 PSMG2Q969U7 264 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 PGAP3Q96FM1 320 aaPredicted RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 TRMT2BQ96GJ1 504 aaKnown RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 CDK5RAP1Q96SZ6 601 aaKnown RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 RAB6CQ9H0N0 254 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 OLA1Q9NTK5 396 aaKnown RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 RBM12Q9NTZ6 932 aaKnown RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 KLHL11Q9NVR0 708 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 LRRD1A4D1F6 860 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 GDF9O60383 454 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 RARAP10276 462 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 HMGA1P17096 107 aaKnown RBP13.71□□□□□ -0.22
SEC13-209ENST00000397117 HOXA6P31267 233 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 SOX9P48436 509 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 PPP3CCP48454 512 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 LRRC32Q14392 662 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 KRT81Q14533 505 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 LONRF2Q1L5Z9 754 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 ARL13BQ3SXY8 428 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 DGKKQ5KSL6 1271 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 ERMARDQ5T6L9 678 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 OTUD1Q5VV17 481 aaPredicted RBP13.71□□□□□ -0.22
SEC13-209ENST00000397117 TAC4Q86UU9 113 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 MAP7D3Q8IWC1 876 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 TEKT4Q8WW24 435 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 RNF25Q96BH1 459 aaPredicted RBP13.71□□□□□ -0.22
SEC13-209ENST00000397117 MYRFLQ96LU7 910 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 LRRC3BQ96PB8 259 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 PEBP4Q96S96 227 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 PIGVQ9NUD9 493 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.71□□□□□ -0.22
SEC13-209ENST00000397117 C2orf42Q9NWW7 574 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 OSER1Q9NX31 292 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 SMARCAL1Q9NZC9 954 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 TTC7AQ9ULT0 858 aaPredicted RBP13.71□□□□□ -0.22
SEC13-209ENST00000397117 ATG2BQ96BY7 2078 aa13.71□□□□□ -0.22
SEC13-209ENST00000397117 A0A1W2PRU2 124 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 MDM4O15151 490 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 FOXD2O60548 495 aaPredicted RBP13.7□□□□□ -0.22
SEC13-209ENST00000397117 ZDHHC11BP0C7U3 371 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 KPNA1P52294 538 aaPredicted RBP13.7□□□□□ -0.22
SEC13-209ENST00000397117 COPS2P61201 443 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 C10orf120Q5SQS8 335 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 AADACL2Q6P093 401 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 TXNDC11Q6PKC3 985 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 Q6ZS52 159 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 BNIPLQ7Z465 357 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 ARID3BQ8IVW6 561 aaPredicted RBP13.7□□□□□ -0.22
SEC13-209ENST00000397117 YAF2Q8IY57 180 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 RAPGEF5Q92565 580 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 SERPINB11Q96P15 392 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 NACA2Q9H009 215 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.7□□□□□ -0.22
SEC13-209ENST00000397117 CALCOCO1Q9P1Z2 691 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 NUDT5Q9UKK9 219 aa13.7□□□□□ -0.22
SEC13-209ENST00000397117 GOLGA6L10A0A0M3HER8 536 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 SPECC1L-ADORA2AF8WAN1 911 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 PDE2AO00408 941 aaPredicted RBP13.69□□□□□ -0.22
SEC13-209ENST00000397117 TLR5O60602 858 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 KDELR1P24390 212 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 HOXC13P31276 330 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 AIF1P55008 147 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 CDH6P55285 790 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 EFEMP1Q12805 493 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 PDK2Q15119 407 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 EFHC2Q5JST6 749 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 HEATR6Q6AI08 1181 aaKnown RBP13.69□□□□□ -0.22
SEC13-209ENST00000397117 MSANTD2Q6P1R3 559 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 SPOCD1Q6ZMY3 1216 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 WDR5BQ86VZ2 330 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 RALGPS2Q86X27 583 aaPredicted RBP13.69□□□□□ -0.22
SEC13-209ENST00000397117 PSTKQ8IV42 348 aaKnown RBP13.69□□□□□ -0.22
SEC13-209ENST00000397117 FAM160A2Q8N612 972 aaPredicted RBP13.69□□□□□ -0.22
SEC13-209ENST00000397117 CCDC185Q8N715 623 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 SNRNP25Q9BV90 132 aaKnown RBP13.69□□□□□ -0.22
SEC13-209ENST00000397117 CALN1Q9BXU9 219 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms