RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 PTPRDP23468 1912 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 MGRN1O60291 552 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 CYP11A1P05108 521 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 SNRPAP09012 282 aaKnown RBP14.35□□□□□ -0.11
SNCA-204ENST00000394989 ODC1P11926 461 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 AIF1P55008 147 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 CCDC15Q0P6D6 951 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 OLIG2Q13516 323 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 SEPT7Q16181 437 aaKnown RBP14.35□□□□□ -0.11
SNCA-204ENST00000394989 LRRC8BQ6P9F7 803 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 FAM43BQ6ZT52 329 aaPredicted RBP14.35□□□□□ -0.11
SNCA-204ENST00000394989 EGFL6Q8IUX8 553 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
SNCA-204ENST00000394989 SRPK1Q96SB4 655 aaKnown RBP14.35□□□□□ -0.11
SNCA-204ENST00000394989 ACBD6Q9BR61 282 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 ZCWPW1Q9H0M4 648 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 NUMBLQ9Y6R0 609 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 ALDH1A2O94788 518 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 MLNP12872 115 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 CDK16Q00536 496 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 INTS6LQ5JSJ4 861 aaKnown RBP14.34□□□□□ -0.11
SNCA-204ENST00000394989 STEAP4Q687X5 459 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 PM20D1Q6GTS8 502 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 CAPRIN2Q6IMN6 1127 aaKnown RBP14.34□□□□□ -0.11
SNCA-204ENST00000394989 ZNF483Q8TF39 744 aaPredicted RBP14.34□□□□□ -0.11
SNCA-204ENST00000394989 PGLYRP2Q96PD5 576 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 MYLK2Q9H1R3 596 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 MANSC1Q9H8J5 431 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 EIF2B3Q9NR50 452 aaKnown RBP14.34□□□□□ -0.11
SNCA-204ENST00000394989 M0QZQ0 153 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 KRT37O76014 449 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 KANSL3Q9P2N6 904 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 INPP5FQ9Y2H2 1132 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 B4GALT3O60512 393 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 ELNP15502 786 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 MGAT1P26572 445 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 RAB27AP51159 221 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 TPI1P60174 286 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 OVGP1Q12889 678 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 PARP6Q2NL67 630 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 TRIM71Q2Q1W2 868 aaKnown RBP14.34□□□□□ -0.11
SNCA-204ENST00000394989 CHSY1Q86X52 802 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 THSD7BQ9C0I4 1608 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 TKTL2Q9H0I9 626 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 NPHS2Q9NP85 383 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 USH1CQ9Y6N9 552 aa14.34□□□□□ -0.11
SNCA-204ENST00000394989 TMEM88BA6NKF7 163 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 PTPN3P26045 913 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 CCNFP41002 786 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 CXCR3P49682 368 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 SESN2P58004 480 aaPredicted RBP14.33□□□□□ -0.12
SNCA-204ENST00000394989 MROH9Q5TGP6 573 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 BSPRYQ5W0U4 402 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 CYS1Q717R9 158 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 ASRGL1Q7L266 308 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 SCAMP5Q8TAC9 235 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 DEPDC1BQ8WUY9 529 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 RSPH1Q8WYR4 309 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 TTC17Q96AE7 1141 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 ZNF570Q96NI8 536 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 SPATS2LQ9NUQ6 558 aaKnown RBP14.33□□□□□ -0.12
SNCA-204ENST00000394989 IGSF9Q9P2J2 1179 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 PATJQ8NI35 1801 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 SDR42E2A6NKP2 422 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 PDHA1P08559 390 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 HCAR3P49019 387 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 GRIK3Q13003 919 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 TAC4Q86UU9 113 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 RFWD2Q8NHY2 731 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 ERP27Q96DN0 273 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 WDCPQ9H6R7 721 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 OR12D3Q9UGF7 316 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 C15orf41Q9Y2V0 281 aa14.33□□□□□ -0.12
SNCA-204ENST00000394989 COPEO14579 308 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 STK10O94804 968 aaKnown RBP14.32□□□□□ -0.12
SNCA-204ENST00000394989 TOP3BO95985 862 aaKnown RBP14.32□□□□□ -0.12
SNCA-204ENST00000394989 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
SNCA-204ENST00000394989 CCNB1P14635 433 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 BGNP21810 368 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 YY1P25490 414 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 PGFP49763 221 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 PPIDQ08752 370 aaKnown RBP14.32□□□□□ -0.12
SNCA-204ENST00000394989 NIPAL4Q0D2K0 466 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 TUSC3Q13454 348 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 CASC4Q6P4E1 433 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 ZNF598Q86UK7 904 aaKnown RBP14.32□□□□□ -0.12
SNCA-204ENST00000394989 SYBUQ9NX95 663 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 PLLPQ9Y342 182 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 NUP205Q92621 2012 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 SERPINB4P48594 390 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 EIF4EBP2Q13542 120 aaPredicted RBP14.32□□□□□ -0.12
SNCA-204ENST00000394989 CES4AQ5XG92 561 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 PID1Q7Z2X4 250 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 KLHL29Q96CT2 875 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 PGBD4Q96DM1 585 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 MECRQ9BV79 373 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 SLC13A1Q9BZW2 595 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 IL1RAPL1Q9NZN1 696 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 NEU3Q9UQ49 428 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 LRIG2O94898 1065 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms