RNA–Protein interactions for RNA: ENST00000393307.5

RAB43-204, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-204ENST00000393307 CSPG4P5Q96PW8 444 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 PITPNM3Q9BZ71 974 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 POLBP06746 335 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 ARHGAP15Q53QZ3 475 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 RASGEF1CQ8N431 466 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 FICDQ9BVA6 458 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 CINPQ9BW66 212 aaPredicted RBP13.17□□□□□ -0.3
RAB43-204ENST00000393307 CIPCQ9C0C6 399 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 PCMTD2Q9NV79 361 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.17□□□□□ -0.3
RAB43-204ENST00000393307 PCYOX1Q9UHG3 505 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 DCTN4Q9UJW0 460 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 AVILO75366 819 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 CHN1P15882 459 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 GABRR2P28476 465 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 OXCT1P55809 520 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 POLD3Q15054 466 aaPredicted RBP13.17□□□□□ -0.3
RAB43-204ENST00000393307 NAPEPLDQ6IQ20 393 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 TAC4Q86UU9 113 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 ITIH5Q86UX2 942 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 PTPRN2Q92932 1015 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 TMA16Q96EY4 203 aaKnown RBP13.17□□□□□ -0.3
RAB43-204ENST00000393307 SEC16BQ96JE7 1060 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 ATP13A1Q9HD20 1204 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 GDAP2Q9NXN4 497 aa13.17□□□□□ -0.3
RAB43-204ENST00000393307 TMEM120BA0PK00 339 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 C5orf60A6NFR6 353 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 STK25O00506 426 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 PSMB4P28070 264 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 MAXP61244 160 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 CLDN10P78369 228 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 RAD51Q06609 339 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 INCA1Q0VD86 236 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 DUPD1Q68J44 220 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 CCNYL1Q8N7R7 359 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 PPHLN1Q8NEY8 458 aaKnown RBP13.16□□□□□ -0.3
RAB43-204ENST00000393307 EXOC2Q96KP1 924 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 SMOQ99835 787 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 GPR62Q9BZJ7 368 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 NEUROG2Q9H2A3 272 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 TRIM49D1C9J1S8 452 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 PITX1P78337 314 aaPredicted RBP13.16□□□□□ -0.3
RAB43-204ENST00000393307 BMPR2Q13873 1038 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 PTK6Q13882 451 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 TAF1BQ53T94 588 aaPredicted RBP13.16□□□□□ -0.3
RAB43-204ENST00000393307 RFWD3Q6PCD5 774 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 STRADAQ7RTN6 431 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 LRRC6Q86X45 466 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 ARMC2Q8NEN0 867 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 FNIP1Q8TF40 1166 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 USP6NLQ92738 828 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.16□□□□□ -0.3
RAB43-204ENST00000393307 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 EMILIN2Q9BXX0 1053 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 MAGEB5Q9BZ81 275 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 XAB2Q9HCS7 855 aaKnown RBP13.16□□□□□ -0.3
RAB43-204ENST00000393307 HCSTQ9UBK5 93 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 A8MUI8 341 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 ANP32DO95626 131 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 CSH1P0DML2 217 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 CSH2P0DML3 217 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 TFE3P19532 575 aaPredicted RBP13.16□□□□□ -0.3
RAB43-204ENST00000393307 TNFRSF8P28908 595 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 PLD5Q8N7P1 536 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 PRMT1Q99873 361 aaKnown RBP13.16□□□□□ -0.3
RAB43-204ENST00000393307 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 PSMC3IPQ9P2W1 217 aaPredicted RBP13.16□□□□□ -0.3
RAB43-204ENST00000393307 GGT7Q9UJ14 662 aa13.16□□□□□ -0.3
RAB43-204ENST00000393307 A0A0G2JND7 137 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 BUD23O43709 281 aaKnown RBP13.15□□□□□ -0.3
RAB43-204ENST00000393307 FAM163BP0C2L3 166 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 MGAT1P26572 445 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 FDFT1P37268 417 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 ABCG1P45844 678 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 UPP1Q16831 310 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 RAB6CQ53S08 254 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 SLC45A4Q5BKX6 768 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
RAB43-204ENST00000393307 TMEM110Q86TL2 294 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 CCDC197Q8NCU1 140 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 STK32AQ8WU08 396 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 MAML1Q92585 1016 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 ALKBH8Q96BT7 664 aaKnown RBP13.15□□□□□ -0.3
RAB43-204ENST00000393307 KCTD15Q96SI1 283 aaPredicted RBP13.15□□□□□ -0.3
RAB43-204ENST00000393307 FOXP3Q9BZS1 431 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 RAB6CQ9H0N0 254 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 OLA1Q9NTK5 396 aaKnown RBP13.15□□□□□ -0.3
RAB43-204ENST00000393307 SDR42E2A6NKP2 422 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 RIPK2O43353 540 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 ZNF623O75123 536 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 ANXA9O76027 345 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 MTA2O94776 668 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 SHBGP04278 402 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 GCKP35557 465 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 IFI35P80217 286 aaPredicted RBP13.15□□□□□ -0.3
RAB43-204ENST00000393307 NSUN2Q08J23 767 aaKnown RBP eCLIP13.15□□□□□ -0.3
RAB43-204ENST00000393307 ANKRD20A2Q5SQ80 823 aa13.15□□□□□ -0.3
RAB43-204ENST00000393307 ANKRD20A1Q5TYW2 823 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms