RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CAMK1DQ8IU85 385 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 CADM3Q8N126 398 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 C12orf50Q8NA57 414 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 BEST2Q8NFU1 509 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PJA1Q8NG27 643 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 LILRB1Q8NHL6 650 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 JPH3Q8WXH2 748 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 CIB1Q99828 191 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 SLC4A5Q9BY07 1137 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 C12orf65Q9H3J6 166 aaKnown RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 UBE2TQ9NPD8 197 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 POLE4Q9NR33 117 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ACTR3BQ9P1U1 418 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 HMGXB4Q9UGU5 601 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 FADS2P1A8MWK0 482 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 APOL1O14791 398 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ZBTB39O15060 712 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 EXTL3O43909 919 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 CPNE3O75131 537 aaKnown RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 SLC4A1P02730 911 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ALDH2P05091 517 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 CYP1A2P05177 515 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ABHD2P08910 425 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 GARTP22102 1010 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 MYL7Q01449 175 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 CDK18Q07002 472 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 CD300CQ08708 224 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 DSC3Q14574 896 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 COL19A1Q14993 1142 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 SLFN13Q68D06 897 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 JADE1Q6IE81 842 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 STYK1Q6J9G0 422 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 NLRX1Q86UT6 975 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 CLEC10AQ8IUN9 316 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 BRSK1Q8TDC3 778 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 SLC5A5Q92911 643 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 APOPT1Q96IL0 206 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TCF12Q99081 682 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TMEM47Q9BQJ4 181 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TXLNGYQ9BZA5 131 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ASPSCR1Q9BZE9 553 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 DNAJC18Q9H819 358 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TMEM9Q9P0T7 183 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PSME2Q9UL46 239 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ORC6Q9Y5N6 252 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TLL2Q9Y6L7 1015 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ZHX2Q9Y6X8 837 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 FRMPD4Q14CM0 1322 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ANKRD63C9JTQ0 380 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TRIM24O15164 1050 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TNNC2P02585 160 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PTGIRP43119 386 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 P2RX3P56373 397 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PUDPQ08623 228 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ILF2Q12905 390 aaKnown RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 COASYQ13057 564 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 DPYSQ14117 519 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PPP2R5DQ14738 602 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TNFAIP8L3Q5GJ75 292 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PAGE2Q7Z2X7 111 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 BNIPLQ7Z465 357 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PTAR1Q7Z6K3 402 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 CADM2Q8N3J6 435 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TTLL6Q8N841 843 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 VGLL2Q8N8G2 317 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 DCPSQ96C86 337 aaKnown RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 YME1L1Q96TA2 773 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 AGPAT1Q99943 283 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 FANCFQ9NPI8 374 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 POLR3BQ9NW08 1133 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PAQR5Q9NXK6 330 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 BAG5Q9UL15 447 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ISPDA4D126 451 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 DCAF8L1A6NGE4 600 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 TBX1O43435 398 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 AP1G1O43747 822 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 YES1P07947 543 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 MARSP56192 900 aaKnown RBP7.79□□□□□ -1.16
VTI1A-201ENST00000393077 DYNLT1P63172 113 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 RPS6KA2Q15349 733 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 CLEC4FQ8N1N0 589 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 OR5H6Q8NGV6 325 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 PEX13Q92968 403 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 CEP95Q96GE4 821 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 COQ10BQ9H8M1 238 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 MAT2BQ9NZL9 334 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 NCKIPSDQ9NZQ3 722 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 IP6K2Q9UHH9 426 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 PCDHA1Q9Y5I3 950 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 ABCC6O95255 1503 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 A0A088AWK7 358 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 MYMKA6NI61 221 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 WDR64B1ANS9 1081 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 RFPL2O75678 378 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 UGT2B4P06133 528 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 NMT1P30419 496 aaKnown RBP7.79□□□□□ -1.16
VTI1A-201ENST00000393077 SSTR1P30872 391 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 PSMC2P35998 433 aaKnown RBP7.79□□□□□ -1.16
VTI1A-201ENST00000393077 CRKP46108 304 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 PFKPQ01813 784 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms