RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 FPR1P21462 350 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 SFPQP23246 707 aaKnown RBP eCLIP3.68□□□□□ -1.82
XRN1-202ENST00000392981 APEX1P27695 318 aaKnown RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 MAP4P27816 1152 aaKnown RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 IRAK1P51617 712 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 RPL7AP62424 266 aaKnown RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 OLR1P78380 273 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 FILIP1LQ4L180 1135 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 VASNQ6EMK4 673 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 MAMDC4Q6UXC1 1216 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 GPAT4Q86UL3 456 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 UNC5CLQ8IV45 518 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 DCLK2Q8N568 766 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 DAGLBQ8NCG7 672 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 DHX58Q96C10 678 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 MAGED4Q96JG8 741 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 C16orf92Q96LL3 132 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 CFAP57Q96MR6 1250 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 POLR3CQ9BUI4 534 aaPredicted RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 MECRQ9BV79 373 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 KIFC3Q9BVG8 833 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 RAB17Q9H0T7 212 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 WNT8AQ9H1J5 351 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 HRH4Q9H3N8 390 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 SLC35D1Q9NTN3 355 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 PIM2Q9P1W9 311 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 ELOA3CA0A087WX78 387 aaPredicted RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 ELOA3DA6NLF2 546 aaPredicted RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 SGSM2O43147 1006 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 USP2O75604 605 aaPredicted RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 PRLP01236 227 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 ALBP02768 609 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 PCCBP05166 539 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 UGT2B4P06133 528 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 ARSFP54793 590 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 LMAN2Q12907 356 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 BAK1Q16611 211 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 DGKDQ16760 1214 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 ELOA3BQ3SY89 546 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 ZNF362Q5T0B9 420 aaPredicted RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 MPP7Q5T2T1 576 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 UBAP2Q5T6F2 1119 aaKnown RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 CCDC148Q8NFR7 591 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 ELOA3Q8NG57 546 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 ARRDC3Q96B67 414 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 SLC46A1Q96NT5 459 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 TSGA13Q96PP4 275 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 DNAJC18Q9H819 358 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 MOCS1Q9NZB8 636 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 EPS15L1Q9UBC2 864 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 SAE1Q9UBE0 346 aaPredicted RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 E2F3O00716 465 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 AVILO75366 819 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 ERLIN1O75477 346 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 ABHD16AO95870 558 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 F9P00740 461 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 CKBP12277 381 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 FMO4P31512 558 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 SLC16A2P36021 539 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 GARSP41250 739 aaKnown RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 YBEYP58557 167 aaPredicted RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 CEBPZQ03701 1054 aaKnown RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 CST9LP1Q5W188 147 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 MFSD5Q6N075 450 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 NFXL1Q6ZNB6 911 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 MON1AQ86VX9 555 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 DENND6BQ8NEG7 585 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 KBTBD7Q8WVZ9 684 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 FAM162AQ96A26 154 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 HDAC11Q96DB2 347 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 ZSWIM3Q96MP5 696 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 MYOCQ99972 504 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 TACO1Q9BSH4 297 aaKnown RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 TBC1D10AQ9BXI6 508 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 TOR3AQ9H497 397 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 BCAS3Q9H6U6 928 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 TLR8Q9NR97 1041 aaKnown RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 NMRK1Q9NWW6 199 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 TRNAU1APQ9NX07 287 aaKnown RBP3.68□□□□□ -1.82
XRN1-202ENST00000392981 NUDT5Q9UKK9 219 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 ITGA11Q9UKX5 1188 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 LAMA3Q16787 3333 aa3.68□□□□□ -1.82
XRN1-202ENST00000392981 PPRC1Q5VV67 1664 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 CCDC88BA6NC98 1476 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 AQP7P3A6NL99 342 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 PSMD9O00233 223 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 CCNT1O60563 726 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 ETS1P14921 441 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 GCFC2P16383 781 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 IFNAR1P17181 557 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 NCF2P19878 526 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 CD6P30203 668 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 MEOX1P50221 254 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 CYP4F3Q08477 520 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 PRKD1Q15139 912 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 HADHQ16836 314 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 TWISTNBQ3B726 338 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 SLC10A5Q5PT55 438 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms