RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 ITGA9Q13797 1035 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 SNX17Q15036 470 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 CXCL17Q6UXB2 119 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 HPS6Q86YV9 775 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 OR6Y1Q8NGX8 325 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 CXorf38Q8TB03 319 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 PIWIL2Q8TC59 973 aaKnown RBP11.14□□□□□ -0.63
BRF1-204ENST00000392557 PPP2R3CQ969Q6 453 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 FAM149B1Q96BN6 582 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 RNF157Q96PX1 679 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 CNPY3Q9BT09 278 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 FRMD8P1Q9BZ68 369 aaPredicted RBP11.14□□□□□ -0.63
BRF1-204ENST00000392557 FETUBQ9UGM5 382 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 TTLL3Q9Y4R7 772 aa11.14□□□□□ -0.63
BRF1-204ENST00000392557 CHADO15335 359 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 MAGEC1O60732 1142 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 F2P00734 622 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 RAG1P15918 1043 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 TCN1P20061 433 aaPredicted RBP11.13□□□□□ -0.63
BRF1-204ENST00000392557 LMO2P25791 158 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 PEX2P28328 305 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 CDH5P33151 784 aaPredicted RBP11.13□□□□□ -0.63
BRF1-204ENST00000392557 SERPINB5P36952 375 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 BTKQ06187 659 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 KYAT1Q16773 422 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
BRF1-204ENST00000392557 TNS4Q8IZW8 715 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 PLD5Q8N7P1 536 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 GSDMBQ8TAX9 411 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 CLEC4CQ8WTT0 213 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 DHRS4Q9BTZ2 278 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 SNX25Q9H3E2 840 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 FSCN1Q16658 493 aaKnown RBP11.13□□□□□ -0.63
BRF1-204ENST00000392557 PPM1JQ5JR12 505 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 SPDYAQ5MJ70 313 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 TTC30AQ86WT1 665 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 NIPA2Q8N8Q9 360 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 NDRG1Q92597 394 aaKnown RBP11.13□□□□□ -0.63
BRF1-204ENST00000392557 SNX27Q96L92 541 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 C7orf26Q96N11 449 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 TRAPPC9Q96Q05 1148 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 MAGEB5Q9BZ81 275 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 FIS1Q9Y3D6 152 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 C17orf102A2RUQ5 167 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 MYADML2A6NDP7 307 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 TPP1O14773 563 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 RFPL1O75677 317 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 CPT1AP50416 773 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 AQP4P55087 323 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 GBE1Q04446 702 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 USP4Q13107 963 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 MAP7Q14244 749 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 FBXO47Q5MNV8 452 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 FOXB2Q5VYV0 432 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 DHDDSQ86SQ9 333 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 APLFQ8IW19 511 aaPredicted RBP11.13□□□□□ -0.63
BRF1-204ENST00000392557 GALNT4Q8N4A0 578 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 DNAAF3Q8N9W5 541 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 KLHL4Q9C0H6 718 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
BRF1-204ENST00000392557 EFR3BQ9Y2G0 817 aa11.13□□□□□ -0.63
BRF1-204ENST00000392557 SMIM28A0A1B0GU29 152 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 RNASEH1O60930 286 aaKnown RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 KLHL2O95198 593 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 METTL18O95568 372 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 SERPINA6P08185 405 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 DHRS4L1P0CG22 281 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 ZNF865P0CJ78 1059 aaPredicted RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 PTPN7P35236 360 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 GNL1P36915 607 aaPredicted RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 ZNF143P52747 638 aaPredicted RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 ATXN1P54253 815 aaKnown RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 TBL3Q12788 808 aaKnown RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 KCNJ11Q14654 390 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 CA9Q16790 459 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 C9orf57Q5W0N0 161 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 PDPK2PQ6A1A2 396 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 C10orf107Q8IVU9 208 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 CMASQ8NFW8 434 aaPredicted RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 PGLYRP2Q96PD5 576 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 POPDC2Q9HBU9 364 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 GJD2Q9UKL4 321 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 ABT1Q9ULW3 272 aaKnown RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 TIMM13Q9Y5L4 95 aaPredicted RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 ANK1P16157 1881 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 MEIS3P2A8K0S8 358 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 F8W8V4 182 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 FKBP6O75344 327 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 DYNC1I2Q13409 638 aaKnown RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 CNPY1Q3B7I2 92 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 KCNT2Q6UVM3 1135 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 SPATA24Q86W54 205 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 B4GALNT2Q8NHY0 566 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 S100A14Q9HCY8 104 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 ZNF358Q9NW07 568 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 SMIM35A0A1B0GVV1 85 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 IGFBP6P24592 240 aaPredicted RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 CYP2F1P24903 491 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 MLH1P40692 756 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 RGS2P41220 211 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms